T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 51198..81086
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C9172_RS24175 (C9172_24225) | 50564..50791 | + | 228 | WP_000450527 | toxin-antitoxin system antitoxin VapB | - |
| C9172_RS24180 (C9172_24230) | 50791..51189 | + | 399 | WP_000911320 | type II toxin-antitoxin system VapC family toxin | - |
| C9172_RS24185 (C9172_24235) | 51198..53405 | - | 2208 | WP_136848487 | type IV conjugative transfer system coupling protein TraD | virb4 |
| C9172_RS24190 (C9172_24240) | 53687..54166 | - | 480 | WP_001473214 | hypothetical protein | - |
| C9172_RS24195 (C9172_24245) | 54370..55101 | - | 732 | WP_028985894 | conjugal transfer complement resistance protein TraT | - |
| C9172_RS24200 (C9172_24250) | 55133..55630 | - | 498 | WP_032211977 | entry exclusion protein | - |
| C9172_RS24205 (C9172_24255) | 55646..58468 | - | 2823 | WP_028985893 | conjugal transfer mating-pair stabilization protein TraG | traG |
| C9172_RS24210 (C9172_24260) | 58465..59838 | - | 1374 | WP_000944332 | conjugal transfer pilus assembly protein TraH | traH |
| C9172_RS24215 (C9172_24265) | 59825..60217 | - | 393 | WP_000662207 | F-type conjugal transfer protein TrbF | - |
| C9172_RS24220 (C9172_24270) | 60171..60485 | - | 315 | WP_001366111 | P-type conjugative transfer protein TrbJ | - |
| C9172_RS24225 (C9172_24275) | 60475..61020 | - | 546 | WP_001457363 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| C9172_RS24230 (C9172_24280) | 61007..61297 | - | 291 | WP_021521297 | type-F conjugative transfer system pilin chaperone TraQ | - |
| C9172_RS24240 (C9172_24290) | 61693..62034 | - | 342 | WP_000556797 | conjugal transfer protein TrbA | - |
| C9172_RS24245 (C9172_24295) | 62048..62791 | - | 744 | WP_001030373 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| C9172_RS24250 (C9172_24300) | 62784..63041 | - | 258 | WP_000864346 | conjugal transfer protein TrbE | - |
| C9172_RS24255 (C9172_24305) | 63055..64959 | - | 1905 | WP_050481379 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| C9172_RS24260 (C9172_24310) | 65053..65433 | - | 381 | WP_028985891 | hypothetical protein | - |
| C9172_RS24265 (C9172_24315) | 65430..66068 | - | 639 | WP_001035184 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| C9172_RS24270 (C9172_24320) | 66261..66500 | + | 240 | WP_001066128 | hypothetical protein | - |
| C9172_RS24275 (C9172_24325) | 66497..66676 | - | 180 | WP_000970212 | hypothetical protein | - |
| C9172_RS24280 (C9172_24330) | 66697..66821 | - | 125 | Protein_68 | TraU family protein | - |
| C9172_RS24285 (C9172_24335) | 66877..67323 | - | 447 | WP_001289131 | hypothetical protein | - |
| C9172_RS24295 (C9172_24345) | 68050..68592 | - | 543 | WP_032211976 | hypothetical protein | - |
| C9172_RS24300 (C9172_24350) | 68606..69598 | - | 993 | WP_000817328 | conjugal transfer pilus assembly protein TraU | traU |
| C9172_RS24305 (C9172_24355) | 69595..70227 | - | 633 | WP_000877293 | type-F conjugative transfer system protein TraW | traW |
| C9172_RS24310 (C9172_24360) | 70224..70610 | - | 387 | WP_028985889 | type-F conjugative transfer system protein TrbI | - |
| C9172_RS24315 (C9172_24365) | 70607..73234 | - | 2628 | WP_028985888 | type IV secretion system protein TraC | virb4 |
| C9172_RS24320 (C9172_24370) | 73394..73615 | - | 222 | WP_001278980 | conjugal transfer protein TraR | - |
| C9172_RS24325 (C9172_24375) | 73750..74265 | - | 516 | WP_028985887 | type IV conjugative transfer system lipoprotein TraV | traV |
| C9172_RS24330 (C9172_24380) | 74262..74582 | - | 321 | WP_028985886 | conjugal transfer protein TrbD | - |
| C9172_RS24335 (C9172_24385) | 74569..75156 | - | 588 | WP_000002895 | conjugal transfer pilus-stabilizing protein TraP | - |
| C9172_RS24340 (C9172_24390) | 75146..76576 | - | 1431 | WP_000146622 | F-type conjugal transfer pilus assembly protein TraB | traB |
| C9172_RS24345 (C9172_24395) | 76576..77304 | - | 729 | WP_028985884 | type-F conjugative transfer system secretin TraK | traK |
| C9172_RS24350 (C9172_24400) | 77291..77857 | - | 567 | WP_000399759 | type IV conjugative transfer system protein TraE | traE |
| C9172_RS24355 (C9172_24405) | 77879..78190 | - | 312 | WP_000012099 | type IV conjugative transfer system protein TraL | traL |
| C9172_RS24360 (C9172_24410) | 78205..78558 | - | 354 | WP_028985883 | type IV conjugative transfer system pilin TraA | - |
| C9172_RS24365 (C9172_24415) | 78593..78820 | - | 228 | WP_024180943 | conjugal transfer relaxosome protein TraY | - |
| C9172_RS24370 (C9172_24420) | 78939..79586 | - | 648 | WP_136848489 | transcriptional regulator TraJ family protein | - |
| C9172_RS24375 (C9172_24425) | 79780..80163 | - | 384 | WP_001151535 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| C9172_RS24380 (C9172_24430) | 80439..81086 | + | 648 | WP_000602507 | transglycosylase SLT domain-containing protein | virB1 |
| C9172_RS24385 (C9172_24435) | 81382..82203 | - | 822 | WP_001234499 | DUF932 domain-containing protein | - |
| C9172_RS24390 (C9172_24440) | 82322..82609 | - | 288 | WP_000107543 | hypothetical protein | - |
| C9172_RS24400 (C9172_24450) | 82766..83068 | - | 303 | WP_001272236 | hypothetical protein | - |
| C9172_RS24635 (C9172_24455) | 83092..83162 | - | 71 | Protein_91 | single-stranded DNA-binding protein | - |