T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 95567..120283
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CF000_RS30675 (CF000_30675) | 91967..92509 | + | 543 | WP_053390246 | antirestriction protein | - |
| CF000_RS30680 (CF000_30680) | 92532..92954 | - | 423 | WP_077268549 | transglycosylase SLT domain-containing protein | - |
| CF000_RS30685 (CF000_30685) | 93460..93852 | + | 393 | WP_053390193 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| CF000_RS30690 (CF000_30690) | 94091..94765 | + | 675 | WP_075606928 | hypothetical protein | - |
| CF000_RS30695 (CF000_30695) | 94959..95120 | + | 162 | WP_172686697 | TraY domain-containing protein | - |
| CF000_RS30700 (CF000_30700) | 95185..95553 | + | 369 | WP_053390195 | type IV conjugative transfer system pilin TraA | - |
| CF000_RS30705 (CF000_30705) | 95567..95872 | + | 306 | WP_053390196 | type IV conjugative transfer system protein TraL | traL |
| CF000_RS30710 (CF000_30710) | 95892..96458 | + | 567 | WP_053390197 | type IV conjugative transfer system protein TraE | traE |
| CF000_RS30715 (CF000_30715) | 96445..97179 | + | 735 | WP_053390198 | type-F conjugative transfer system secretin TraK | traK |
| CF000_RS30720 (CF000_30720) | 97179..98599 | + | 1421 | Protein_118 | F-type conjugal transfer pilus assembly protein TraB | - |
| CF000_RS30725 (CF000_30725) | 98592..99188 | + | 597 | WP_075606926 | conjugal transfer pilus-stabilizing protein TraP | - |
| CF000_RS30730 (CF000_30730) | 99211..99780 | + | 570 | WP_075606925 | type IV conjugative transfer system lipoprotein TraV | traV |
| CF000_RS30735 (CF000_30735) | 99892..100170 | + | 279 | WP_053390295 | hypothetical protein | - |
| CF000_RS30740 (CF000_30740) | 100177..100365 | + | 189 | WP_053390294 | hypothetical protein | - |
| CF000_RS32600 | 100449..100850 | + | 402 | WP_075606924 | hypothetical protein | - |
| CF000_RS30750 (CF000_30750) | 100847..101146 | + | 300 | WP_053390307 | hypothetical protein | - |
| CF000_RS30755 (CF000_30755) | 101305..101616 | + | 312 | WP_227524648 | hypothetical protein | - |
| CF000_RS30760 (CF000_30760) | 101709..104348 | + | 2640 | WP_075606922 | type IV secretion system protein TraC | virb4 |
| CF000_RS30765 (CF000_30765) | 104348..104737 | + | 390 | WP_060415481 | type-F conjugative transfer system protein TrbI | - |
| CF000_RS30770 (CF000_30770) | 104734..105360 | + | 627 | WP_060415482 | type-F conjugative transfer system protein TraW | traW |
| CF000_RS30775 (CF000_30775) | 105404..106363 | + | 960 | WP_088912317 | conjugal transfer pilus assembly protein TraU | traU |
| CF000_RS30780 (CF000_30780) | 106376..107002 | + | 627 | WP_075606921 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| CF000_RS30785 (CF000_30785) | 106999..108954 | + | 1956 | WP_075606920 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| CF000_RS30790 (CF000_30790) | 108986..109246 | + | 261 | WP_053390216 | hypothetical protein | - |
| CF000_RS30795 (CF000_30795) | 109239..109850 | + | 612 | WP_053390217 | hypothetical protein | - |
| CF000_RS30800 (CF000_30800) | 109840..110082 | + | 243 | WP_082226157 | conjugal transfer protein TrbE | - |
| CF000_RS30805 (CF000_30805) | 110128..110454 | + | 327 | WP_053390219 | hypothetical protein | - |
| CF000_RS30810 (CF000_30810) | 110475..111227 | + | 753 | WP_053390220 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| CF000_RS30815 (CF000_30815) | 111238..111474 | + | 237 | WP_053390221 | type-F conjugative transfer system pilin chaperone TraQ | - |
| CF000_RS30820 (CF000_30820) | 111449..112009 | + | 561 | WP_039698500 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| CF000_RS30825 (CF000_30825) | 111996..113366 | + | 1371 | WP_075606918 | conjugal transfer pilus assembly protein TraH | traH |
| CF000_RS30830 (CF000_30830) | 113366..116221 | + | 2856 | WP_075606917 | conjugal transfer mating-pair stabilization protein TraG | traG |
| CF000_RS32080 | 116238..116909 | + | 672 | WP_088883382 | hypothetical protein | - |
| CF000_RS32605 | 117155..117847 | + | 693 | WP_202395549 | hypothetical protein | - |
| CF000_RS30840 (CF000_30840) | 117965..120283 | + | 2319 | WP_075606915 | type IV conjugative transfer system coupling protein TraD | virb4 |