T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 22407..47577
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CKQ55_RS32315 (CKQ55_31015) | 17504..17827 | + | 324 | WP_008324183 | hypothetical protein | - |
| CKQ55_RS31020 (CKQ55_31020) | 17889..18248 | + | 360 | WP_015493069 | hypothetical protein | - |
| CKQ55_RS31025 (CKQ55_31025) | 18875..19249 | + | 375 | WP_008324180 | hypothetical protein | - |
| CKQ55_RS31030 (CKQ55_31030) | 19303..19590 | + | 288 | WP_008324178 | hypothetical protein | - |
| CKQ55_RS31035 (CKQ55_31035) | 19637..19981 | + | 345 | WP_008324177 | hypothetical protein | - |
| CKQ55_RS31040 (CKQ55_31040) | 20067..20330 | + | 264 | WP_008324174 | hypothetical protein | - |
| CKQ55_RS31045 (CKQ55_31045) | 20373..21203 | + | 831 | WP_008324171 | N-6 DNA methylase | - |
| CKQ55_RS31050 (CKQ55_31050) | 21830..22360 | + | 531 | WP_008324170 | antirestriction protein | - |
| CKQ55_RS31055 (CKQ55_31055) | 22407..22883 | - | 477 | WP_008324168 | transglycosylase SLT domain-containing protein | virB1 |
| CKQ55_RS31060 (CKQ55_31060) | 23315..23707 | + | 393 | WP_008324167 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| CKQ55_RS31065 (CKQ55_31065) | 23896..24585 | + | 690 | WP_008324166 | hypothetical protein | - |
| CKQ55_RS31070 (CKQ55_31070) | 24672..24896 | + | 225 | WP_008324165 | TraY domain-containing protein | - |
| CKQ55_RS31075 (CKQ55_31075) | 24954..25304 | + | 351 | WP_016247536 | type IV conjugative transfer system pilin TraA | - |
| CKQ55_RS31080 (CKQ55_31080) | 25455..25760 | + | 306 | WP_016479987 | type IV conjugative transfer system protein TraL | traL |
| CKQ55_RS31085 (CKQ55_31085) | 25775..26341 | + | 567 | WP_016247535 | type IV conjugative transfer system protein TraE | traE |
| CKQ55_RS31090 (CKQ55_31090) | 26328..27071 | + | 744 | WP_008324157 | type-F conjugative transfer system secretin TraK | traK |
| CKQ55_RS31095 (CKQ55_31095) | 27058..28452 | + | 1395 | WP_016479986 | F-type conjugal transfer pilus assembly protein TraB | traB |
| CKQ55_RS31100 (CKQ55_31100) | 28474..29013 | + | 540 | WP_016247533 | type IV conjugative transfer system lipoprotein TraV | traV |
| CKQ55_RS31105 (CKQ55_31105) | 29133..29357 | + | 225 | WP_008324141 | TraR/DksA C4-type zinc finger protein | - |
| CKQ55_RS31110 (CKQ55_31110) | 29361..29546 | + | 186 | WP_008324139 | hypothetical protein | - |
| CKQ55_RS32635 | 29764..29931 | + | 168 | WP_223274120 | Clp protease | - |
| CKQ55_RS31120 (CKQ55_31120) | 29921..30487 | + | 567 | WP_008324135 | conjugal transfer pilus-stabilizing protein TraP | - |
| CKQ55_RS31125 (CKQ55_31125) | 30480..33110 | + | 2631 | WP_008324134 | type IV secretion system protein TraC | virb4 |
| CKQ55_RS31130 (CKQ55_31130) | 33107..33508 | + | 402 | WP_095762646 | type-F conjugative transfer system protein TrbI | - |
| CKQ55_RS31135 (CKQ55_31135) | 33453..34100 | + | 648 | WP_008324132 | type-F conjugative transfer system protein TraW | traW |
| CKQ55_RS31140 (CKQ55_31140) | 34103..35089 | + | 987 | WP_042934586 | conjugal transfer pilus assembly protein TraU | traU |
| CKQ55_RS31145 (CKQ55_31145) | 35106..35735 | + | 630 | WP_008324130 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| CKQ55_RS31150 (CKQ55_31150) | 35732..37585 | + | 1854 | WP_016479983 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| CKQ55_RS31155 (CKQ55_31155) | 37617..37805 | + | 189 | WP_008324128 | conjugal transfer protein TrbE | - |
| CKQ55_RS31160 (CKQ55_31160) | 37836..38585 | + | 750 | WP_008324127 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| CKQ55_RS31165 (CKQ55_31165) | 38602..38850 | + | 249 | WP_016479982 | type-F conjugative transfer system pilin chaperone TraQ | - |
| CKQ55_RS31170 (CKQ55_31170) | 38840..39394 | + | 555 | WP_008324125 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| CKQ55_RS31175 (CKQ55_31175) | 39387..39815 | + | 429 | WP_008324122 | hypothetical protein | - |
| CKQ55_RS31180 (CKQ55_31180) | 39802..41172 | + | 1371 | WP_016247527 | conjugal transfer pilus assembly protein TraH | traH |
| CKQ55_RS31185 (CKQ55_31185) | 41172..43994 | + | 2823 | WP_008324119 | conjugal transfer mating-pair stabilization protein TraG | traG |
| CKQ55_RS31190 (CKQ55_31190) | 44016..44447 | + | 432 | WP_008324118 | entry exclusion protein | - |
| CKQ55_RS32640 | 44522..44860 | + | 339 | WP_032072912 | tetratricopeptide repeat protein | - |
| CKQ55_RS32645 | 44868..45197 | + | 330 | WP_223856629 | tetratricopeptide repeat protein | - |
| CKQ55_RS31200 (CKQ55_31200) | 45331..47577 | + | 2247 | WP_016479979 | type IV conjugative transfer system coupling protein TraD | virb4 |