T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 72153..96870
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CKQ55_RS30510 (CKQ55_30510) | 72153..74471 | - | 2319 | WP_075606915 | type IV conjugative transfer system coupling protein TraD | virb4 |
| CKQ55_RS32610 | 74590..75282 | - | 693 | WP_202395549 | hypothetical protein | - |
| CKQ55_RS32115 | 75528..76199 | - | 672 | WP_088883382 | hypothetical protein | - |
| CKQ55_RS30520 (CKQ55_30520) | 76216..79071 | - | 2856 | WP_075606917 | conjugal transfer mating-pair stabilization protein TraG | traG |
| CKQ55_RS30525 (CKQ55_30525) | 79071..80441 | - | 1371 | WP_075606918 | conjugal transfer pilus assembly protein TraH | traH |
| CKQ55_RS30530 (CKQ55_30530) | 80428..80988 | - | 561 | WP_039698500 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| CKQ55_RS30535 (CKQ55_30535) | 80963..81199 | - | 237 | WP_053390221 | type-F conjugative transfer system pilin chaperone TraQ | - |
| CKQ55_RS30540 (CKQ55_30540) | 81210..81962 | - | 753 | WP_053390220 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| CKQ55_RS30545 (CKQ55_30545) | 81983..82309 | - | 327 | WP_053390219 | hypothetical protein | - |
| CKQ55_RS30550 (CKQ55_30550) | 82355..82597 | - | 243 | WP_082226157 | conjugal transfer protein TrbE | - |
| CKQ55_RS30555 (CKQ55_30555) | 82587..83198 | - | 612 | WP_053390217 | hypothetical protein | - |
| CKQ55_RS30560 (CKQ55_30560) | 83191..83451 | - | 261 | WP_053390216 | hypothetical protein | - |
| CKQ55_RS30565 (CKQ55_30565) | 83483..85438 | - | 1956 | WP_075606920 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| CKQ55_RS30570 (CKQ55_30570) | 85435..86061 | - | 627 | WP_075606921 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| CKQ55_RS30575 (CKQ55_30575) | 86074..87033 | - | 960 | WP_088912317 | conjugal transfer pilus assembly protein TraU | traU |
| CKQ55_RS30580 (CKQ55_30580) | 87077..87703 | - | 627 | WP_060415482 | type-F conjugative transfer system protein TraW | traW |
| CKQ55_RS30585 (CKQ55_30585) | 87700..88089 | - | 390 | WP_060415481 | type-F conjugative transfer system protein TrbI | - |
| CKQ55_RS30590 (CKQ55_30590) | 88089..90728 | - | 2640 | WP_075606922 | type IV secretion system protein TraC | virb4 |
| CKQ55_RS30595 (CKQ55_30595) | 90821..91132 | - | 312 | WP_227524648 | hypothetical protein | - |
| CKQ55_RS30600 (CKQ55_30600) | 91291..91590 | - | 300 | WP_053390307 | hypothetical protein | - |
| CKQ55_RS32615 | 91587..91988 | - | 402 | WP_075606924 | hypothetical protein | - |
| CKQ55_RS30610 (CKQ55_30610) | 92072..92260 | - | 189 | WP_053390294 | hypothetical protein | - |
| CKQ55_RS30615 (CKQ55_30615) | 92267..92545 | - | 279 | WP_053390295 | hypothetical protein | - |
| CKQ55_RS30620 (CKQ55_30620) | 92657..93226 | - | 570 | WP_075606925 | type IV conjugative transfer system lipoprotein TraV | traV |
| CKQ55_RS30625 (CKQ55_30625) | 93249..93845 | - | 597 | WP_075606926 | conjugal transfer pilus-stabilizing protein TraP | - |
| CKQ55_RS30630 (CKQ55_30630) | 93838..95258 | - | 1421 | Protein_96 | F-type conjugal transfer pilus assembly protein TraB | - |
| CKQ55_RS30635 (CKQ55_30635) | 95258..95992 | - | 735 | WP_053390198 | type-F conjugative transfer system secretin TraK | traK |
| CKQ55_RS30640 (CKQ55_30640) | 95979..96545 | - | 567 | WP_053390197 | type IV conjugative transfer system protein TraE | traE |
| CKQ55_RS30645 (CKQ55_30645) | 96565..96870 | - | 306 | WP_053390196 | type IV conjugative transfer system protein TraL | traL |
| CKQ55_RS30650 (CKQ55_30650) | 96884..97252 | - | 369 | WP_053390195 | type IV conjugative transfer system pilin TraA | - |
| CKQ55_RS30655 (CKQ55_30655) | 97317..97478 | - | 162 | WP_172686697 | TraY domain-containing protein | - |
| CKQ55_RS30660 (CKQ55_30660) | 97672..98346 | - | 675 | WP_075606928 | hypothetical protein | - |
| CKQ55_RS30665 (CKQ55_30665) | 98585..98977 | - | 393 | WP_053390193 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| CKQ55_RS30670 (CKQ55_30670) | 99483..99905 | + | 423 | WP_077268549 | transglycosylase SLT domain-containing protein | - |
| CKQ55_RS30675 (CKQ55_30675) | 99928..100470 | - | 543 | WP_053390246 | antirestriction protein | - |