T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 32995..43104
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PDI61_RS00170 (PDI61_00170) | 28118..29380 | - | 1263 | WP_000517490 | ATP-binding protein | - |
| PDI61_RS00175 (PDI61_00175) | 29463..29957 | - | 495 | WP_001215543 | thermonuclease family protein | - |
| PDI61_RS00180 (PDI61_00180) | 29954..30280 | - | 327 | WP_004208538 | hypothetical protein | - |
| PDI61_RS00185 (PDI61_00185) | 30366..30680 | - | 315 | WP_000754496 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| PDI61_RS00190 (PDI61_00190) | 30768..31160 | - | 393 | WP_000738524 | cag pathogenicity island Cag12 family protein | - |
| PDI61_RS00195 (PDI61_00195) | 31157..32992 | - | 1836 | WP_000053822 | type IV secretory system conjugative DNA transfer family protein | - |
| PDI61_RS00200 (PDI61_00200) | 32995..34029 | - | 1035 | WP_000650512 | P-type DNA transfer ATPase VirB11 | virB11 |
| PDI61_RS00205 (PDI61_00205) | 34026..34223 | - | 198 | WP_000629109 | DNA-binding protein | - |
| PDI61_RS00210 (PDI61_00210) | 34225..35439 | - | 1215 | WP_001295060 | VirB10/TraB/TrbI family type IV secretion system protein | virB10 |
| PDI61_RS00215 (PDI61_00215) | 35436..36365 | - | 930 | WP_000783386 | TrbG/VirB9 family P-type conjugative transfer protein | virB9 |
| PDI61_RS00220 (PDI61_00220) | 36371..37099 | - | 729 | WP_000505940 | type IV secretion system protein | virB8 |
| PDI61_RS00225 (PDI61_00225) | 37294..38349 | - | 1056 | WP_000235886 | type IV secretion system protein | virB6 |
| PDI61_RS00230 (PDI61_00230) | 38361..38618 | - | 258 | WP_000759841 | EexN family lipoprotein | - |
| PDI61_RS00235 (PDI61_00235) | 38628..39398 | - | 771 | WP_000716326 | type IV secretion system protein | - |
| PDI61_RS00240 (PDI61_00240) | 39408..42161 | - | 2754 | WP_000108726 | VirB3 family type IV secretion system protein | virb4 |
| PDI61_RS00245 (PDI61_00245) | 42186..42476 | - | 291 | WP_000916156 | TrbC/VirB2 family protein | virB2 |
| PDI61_RS00250 (PDI61_00250) | 42460..43104 | - | 645 | WP_000953538 | lytic transglycosylase domain-containing protein | virB1 |
| PDI61_RS00255 (PDI61_00255) | 43150..43386 | - | 237 | WP_001348696 | hypothetical protein | - |
| PDI61_RS00260 (PDI61_00260) | 43337..43846 | - | 510 | WP_000455437 | transcription termination/antitermination NusG family protein | - |
| PDI61_RS00265 (PDI61_00265) | 44199..45359 | - | 1161 | WP_000539528 | MobP1 family relaxase | - |
| PDI61_RS00270 (PDI61_00270) | 45362..45907 | - | 546 | WP_001348698 | DNA distortion polypeptide 1 | - |
| PDI61_RS00275 (PDI61_00275) | 46248..46505 | - | 258 | WP_004199355 | hypothetical protein | - |
| PDI61_RS00280 (PDI61_00280) | 46502..46666 | - | 165 | WP_000004083 | hypothetical protein | - |
| PDI61_RS00285 (PDI61_00285) | 46741..47079 | - | 339 | WP_001099725 | hypothetical protein | - |
| PDI61_RS00290 (PDI61_00290) | 47173..47415 | - | 243 | WP_000008707 | hypothetical protein | - |
| PDI61_RS00295 (PDI61_00295) | 47405..47674 | - | 270 | WP_001006717 | hypothetical protein | - |