T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 24986..51342
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IBJ92_RS23780 (IBJ92_23765) | 24352..24579 | + | 228 | WP_000450265 | toxin-antitoxin system antitoxin VapB | - |
| IBJ92_RS23785 (IBJ92_23770) | 24579..24977 | + | 399 | WP_000911322 | type II toxin-antitoxin system VapC family toxin | - |
| IBJ92_RS23790 (IBJ92_23775) | 24986..27148 | - | 2163 | WP_000009318 | type IV conjugative transfer system coupling protein TraD | virb4 |
| IBJ92_RS23795 (IBJ92_23780) | 27525..28256 | - | 732 | WP_000782438 | conjugal transfer complement resistance protein TraT | - |
| IBJ92_RS23800 (IBJ92_23785) | 28292..28786 | - | 495 | WP_010999946 | entry exclusion protein | - |
| IBJ92_RS23805 (IBJ92_23790) | 28802..31624 | - | 2823 | WP_001007086 | conjugal transfer mating-pair stabilization protein TraG | traG |
| IBJ92_RS23810 (IBJ92_23795) | 31621..33003 | - | 1383 | WP_001161719 | conjugal transfer pilus assembly protein TraH | traH |
| IBJ92_RS23815 (IBJ92_23800) | 32993..33541 | - | 549 | WP_000055839 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| IBJ92_RS23820 (IBJ92_23805) | 33528..33821 | - | 294 | WP_001233881 | type-F conjugative transfer system pilin chaperone TraQ | - |
| IBJ92_RS23825 (IBJ92_23810) | 34035..34784 | - | 750 | WP_001226854 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| IBJ92_RS23830 (IBJ92_23815) | 34796..35011 | - | 216 | WP_000700023 | conjugal transfer protein TrbE | - |
| IBJ92_RS23835 (IBJ92_23820) | 35022..36848 | - | 1827 | WP_000827528 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| IBJ92_RS23840 (IBJ92_23825) | 36845..37264 | - | 420 | WP_001229397 | HNH endonuclease | - |
| IBJ92_RS23845 (IBJ92_23830) | 37301..37939 | - | 639 | WP_000554823 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| IBJ92_RS23850 (IBJ92_23835) | 37924..38232 | - | 309 | WP_010999945 | hypothetical protein | - |
| IBJ92_RS23855 (IBJ92_23840) | 38251..39243 | - | 993 | WP_000833320 | conjugal transfer pilus assembly protein TraU | traU |
| IBJ92_RS23860 (IBJ92_23845) | 39240..39872 | - | 633 | WP_000871995 | type-F conjugative transfer system protein TraW | traW |
| IBJ92_RS23865 (IBJ92_23850) | 39869..40255 | - | 387 | WP_000105164 | type-F conjugative transfer system protein TrbI | - |
| IBJ92_RS23870 (IBJ92_23855) | 40230..42878 | - | 2649 | WP_000793310 | type IV secretion system protein TraC | virb4 |
| IBJ92_RS23875 (IBJ92_23860) | 42894..43157 | - | 264 | WP_001239255 | hypothetical protein | - |
| IBJ92_RS23880 (IBJ92_23865) | 43274..43741 | - | 468 | WP_000549562 | hypothetical protein | - |
| IBJ92_RS23885 (IBJ92_23870) | 43734..43955 | - | 222 | WP_001278699 | conjugal transfer protein TraR | - |
| IBJ92_RS23890 (IBJ92_23875) | 44090..44605 | - | 516 | WP_001079995 | type IV conjugative transfer system lipoprotein TraV | traV |
| IBJ92_RS23895 (IBJ92_23880) | 44602..44847 | - | 246 | WP_010999944 | DUF2689 domain-containing protein | virb4 |
| IBJ92_RS23900 (IBJ92_23885) | 44825..45421 | - | 597 | WP_000527896 | conjugal transfer pilus-stabilizing protein TraP | - |
| IBJ92_RS23905 (IBJ92_23890) | 45411..46832 | - | 1422 | WP_000146700 | F-type conjugal transfer pilus assembly protein TraB | traB |
| IBJ92_RS23910 (IBJ92_23895) | 46832..47572 | - | 741 | WP_001230719 | type-F conjugative transfer system secretin TraK | traK |
| IBJ92_RS23915 (IBJ92_23900) | 47559..48125 | - | 567 | WP_000399768 | type IV conjugative transfer system protein TraE | traE |
| IBJ92_RS23920 (IBJ92_23905) | 48147..48458 | - | 312 | WP_000012129 | type IV conjugative transfer system protein TraL | traL |
| IBJ92_RS23925 (IBJ92_23910) | 48473..48835 | - | 363 | WP_001274201 | type IV conjugative transfer system pilin TraA | - |
| IBJ92_RS23930 (IBJ92_23915) | 48877..49104 | - | 228 | WP_001676655 | conjugal transfer relaxosome protein TraY | - |
| IBJ92_RS23935 (IBJ92_23920) | 49198..49884 | - | 687 | WP_000336297 | PAS domain-containing protein | - |
| IBJ92_RS23940 (IBJ92_23925) | 50077..50457 | - | 381 | WP_001151546 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| IBJ92_RS23945 (IBJ92_23930) | 50872..51342 | + | 471 | WP_001526856 | transglycosylase SLT domain-containing protein | virB1 |
| IBJ92_RS23950 (IBJ92_23935) | 51653..52471 | - | 819 | Protein_61 | DUF932 domain-containing protein | - |
| IBJ92_RS23955 (IBJ92_23940) | 52574..52732 | - | 159 | WP_001704449 | hypothetical protein | - |
| IBJ92_RS24495 | 52818..52946 | - | 129 | WP_000372429 | hypothetical protein | - |
| IBJ92_RS23960 (IBJ92_23945) | 52981..53718 | - | 738 | WP_000581933 | plasmid SOS inhibition protein A | - |
| IBJ92_RS23965 (IBJ92_23950) | 53715..54149 | - | 435 | WP_010999943 | conjugation system SOS inhibitor PsiB | - |
| IBJ92_RS23970 (IBJ92_23955) | 54189..56186 | - | 1998 | WP_000117513 | ParB/RepB/Spo0J family partition protein | - |