T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 34475..73501
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SH220_RS25010 (SH220_25010) | 29648..30451 | - | 804 | WP_001082319 | aminoglycoside O-phosphotransferase APH(3'')-Ib | - |
| SH220_RS25015 (SH220_25015) | 30512..31327 | - | 816 | WP_001043260 | sulfonamide-resistant dihydropteroate synthase Sul2 | - |
| SH220_RS25020 (SH220_25020) | 32191..34494 | - | 2304 | WP_000077663 | F-type conjugative transfer protein TrbC | - |
| SH220_RS25025 (SH220_25025) | 34475..35599 | - | 1125 | WP_000152378 | DsbC family protein | trbB |
| SH220_RS25030 (SH220_25030) | 35596..36912 | - | 1317 | WP_000121919 | IncI1-type conjugal transfer protein TrbA | trbA |
| SH220_RS25035 (SH220_25035) | 37215..37310 | + | 96 | WP_001388983 | DinQ-like type I toxin DqlB | - |
| SH220_RS25040 (SH220_25040) | 37899..37994 | + | 96 | WP_001388983 | DinQ-like type I toxin DqlB | - |
| SH220_RS25045 (SH220_25045) | 38057..38233 | - | 177 | WP_001054907 | hypothetical protein | - |
| SH220_RS25050 (SH220_25050) | 38383..38850 | - | 468 | WP_000598962 | thermonuclease family protein | - |
| SH220_RS25055 (SH220_25055) | 39010..39633 | + | 624 | WP_001155250 | helix-turn-helix domain-containing protein | - |
| SH220_RS25060 (SH220_25060) | 39831..40046 | - | 216 | WP_000266543 | hypothetical protein | - |
| SH220_RS25065 (SH220_25065) | 40050..40418 | - | 369 | WP_001345852 | hypothetical protein | - |
| SH220_RS25070 (SH220_25070) | 40430..40621 | - | 192 | WP_000751583 | hypothetical protein | - |
| SH220_RS25075 (SH220_25075) | 40709..40951 | - | 243 | WP_000650923 | hypothetical protein | - |
| SH220_RS25080 (SH220_25080) | 41281..41433 | + | 153 | WP_001335079 | Hok/Gef family protein | - |
| SH220_RS25085 (SH220_25085) | 41571..43157 | - | 1587 | WP_000004564 | TnsA endonuclease N-terminal domain-containing protein | - |
| SH220_RS25090 (SH220_25090) | 43431..44078 | - | 648 | WP_015056434 | plasmid IncI1-type surface exclusion protein ExcA | - |
| SH220_RS25095 (SH220_25095) | 44166..46325 | - | 2160 | WP_000691811 | DotA/TraY family protein | traY |
| SH220_RS25100 (SH220_25100) | 46400..46969 | - | 570 | WP_000650752 | conjugal transfer protein TraX | - |
| SH220_RS25105 (SH220_25105) | 46966..48171 | - | 1206 | WP_319795749 | conjugal transfer protein TraW | traW |
| SH220_RS25110 (SH220_25110) | 48129..48749 | - | 621 | WP_000286855 | hypothetical protein | traV |
| SH220_RS25115 (SH220_25115) | 48749..51793 | - | 3045 | WP_016249708 | hypothetical protein | traU |
| SH220_RS25120 (SH220_25120) | 52088..52714 | - | 627 | WP_000785703 | hypothetical protein | traT |
| SH220_RS25125 (SH220_25125) | 52821..53072 | - | 252 | WP_001277573 | hypothetical protein | - |
| SH220_RS25130 (SH220_25130) | 53129..53527 | - | 399 | WP_000088813 | DUF6750 family protein | traR |
| SH220_RS25135 (SH220_25135) | 53574..54104 | - | 531 | WP_000987021 | conjugal transfer protein TraQ | traQ |
| SH220_RS25140 (SH220_25140) | 54101..54814 | - | 714 | WP_000787002 | conjugal transfer protein TraP | traP |
| SH220_RS25145 (SH220_25145) | 54811..56148 | - | 1338 | WP_001557492 | conjugal transfer protein TraO | traO |
| SH220_RS25150 (SH220_25150) | 56152..57126 | - | 975 | WP_000547386 | DotH/IcmK family type IV secretion protein | traN |
| SH220_RS25155 (SH220_25155) | 57137..57832 | - | 696 | WP_001287545 | DotI/IcmL family type IV secretion protein | traM |
| SH220_RS25160 (SH220_25160) | 57844..58194 | - | 351 | WP_001056367 | hypothetical protein | traL |
| SH220_RS25165 (SH220_25165) | 58211..62272 | - | 4062 | WP_000842456 | LPD7 domain-containing protein | - |
| SH220_RS25170 (SH220_25170) | 62336..62626 | - | 291 | WP_000817801 | IcmT/TraK family protein | traK |
| SH220_RS25175 (SH220_25175) | 62623..63771 | - | 1149 | WP_000775210 | plasmid transfer ATPase TraJ | virB11 |
| SH220_RS25180 (SH220_25180) | 63755..64591 | - | 837 | WP_000745049 | type IV secretory system conjugative DNA transfer family protein | traI |
| SH220_RS25185 (SH220_25185) | 64588..65046 | - | 459 | WP_001170111 | DotD/TraH family lipoprotein | - |
| SH220_RS25190 (SH220_25190) | 65150..66352 | - | 1203 | WP_000979993 | conjugal transfer protein TraF | - |
| SH220_RS25195 (SH220_25195) | 66454..67275 | - | 822 | WP_000845373 | hypothetical protein | traE |
| SH220_RS25200 (SH220_25200) | 67440..67634 | - | 195 | Protein_71 | integrase | - |
| SH220_RS25205 (SH220_25205) | 67748..69109 | - | 1362 | WP_001168171 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| SH220_RS25210 (SH220_25210) | 69127..69753 | - | 627 | WP_000939245 | prepilin peptidase | - |
| SH220_RS25215 (SH220_25215) | 69769..70254 | - | 486 | WP_001080767 | lytic transglycosylase domain-containing protein | virB1 |
| SH220_RS25220 (SH220_25220) | 70299..70835 | - | 537 | WP_000111534 | type 4 pilus major pilin | - |
| SH220_RS25225 (SH220_25225) | 70897..71991 | - | 1095 | WP_000697158 | type II secretion system F family protein | - |
| SH220_RS25230 (SH220_25230) | 71993..73501 | - | 1509 | WP_319795750 | ATPase, T2SS/T4P/T4SS family | virB11 |
| SH220_RS25235 (SH220_25235) | 73605..74063 | - | 459 | WP_000095885 | type IV pilus biogenesis protein PilP | - |
| SH220_RS25240 (SH220_25240) | 74053..75348 | - | 1296 | WP_000129882 | type 4b pilus protein PilO2 | - |
| SH220_RS25245 (SH220_25245) | 75369..76988 | - | 1620 | WP_001035565 | PilN family type IVB pilus formation outer membrane protein | - |
| SH220_RS25250 (SH220_25250) | 77020..77433 | - | 414 | WP_124983997 | type IV pilus biogenesis protein PilM | - |