T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 1688..24352
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LT671_RS02160 (LT671_02155) | 18..137 | + | 120 | WP_001426400 | hypothetical protein | - |
| LT671_RS02165 (LT671_02160) | 162..449 | + | 288 | WP_000107537 | hypothetical protein | - |
| LT671_RS02170 (LT671_02165) | 570..1391 | + | 822 | WP_001234469 | DUF932 domain-containing protein | - |
| LT671_RS02175 (LT671_02170) | 1688..2335 | - | 648 | WP_000614282 | transglycosylase SLT domain-containing protein | virB1 |
| LT671_RS02180 (LT671_02175) | 2621..3004 | + | 384 | WP_001151564 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| LT671_RS02185 (LT671_02180) | 3198..3884 | + | 687 | WP_000332487 | PAS domain-containing protein | - |
| LT671_RS02190 (LT671_02185) | 3978..4205 | + | 228 | WP_001254388 | conjugal transfer relaxosome protein TraY | - |
| LT671_RS02195 (LT671_02190) | 4239..4601 | + | 363 | WP_001098998 | type IV conjugative transfer system pilin TraA | - |
| LT671_RS02200 (LT671_02195) | 4606..4917 | + | 312 | WP_000012106 | type IV conjugative transfer system protein TraL | traL |
| LT671_RS02205 (LT671_02200) | 4939..5505 | + | 567 | WP_000399804 | type IV conjugative transfer system protein TraE | traE |
| LT671_RS02210 (LT671_02205) | 5492..6220 | + | 729 | WP_001230787 | type-F conjugative transfer system secretin TraK | traK |
| LT671_RS02215 (LT671_02210) | 6220..7647 | + | 1428 | WP_000146638 | F-type conjugal transfer pilus assembly protein TraB | traB |
| LT671_RS02220 (LT671_02215) | 7637..8221 | + | 585 | WP_000002795 | conjugal transfer pilus-stabilizing protein TraP | - |
| LT671_RS02225 (LT671_02220) | 8208..8528 | + | 321 | WP_001057302 | conjugal transfer protein TrbD | virb4 |
| LT671_RS02230 (LT671_02225) | 8521..8772 | + | 252 | WP_001038341 | conjugal transfer protein TrbG | - |
| LT671_RS02235 (LT671_02230) | 8769..9284 | + | 516 | WP_000809893 | type IV conjugative transfer system lipoprotein TraV | traV |
| LT671_RS02240 (LT671_02235) | 9419..9640 | + | 222 | WP_001278978 | conjugal transfer protein TraR | - |
| LT671_RS02245 (LT671_02240) | 9800..12427 | + | 2628 | WP_001064239 | type IV secretion system protein TraC | virb4 |
| LT671_RS02250 (LT671_02245) | 12424..12810 | + | 387 | WP_000214082 | type-F conjugative transfer system protein TrbI | - |
| LT671_RS02255 (LT671_02250) | 12807..13439 | + | 633 | WP_001203720 | type-F conjugative transfer system protein TraW | traW |
| LT671_RS02260 (LT671_02255) | 13436..14428 | + | 993 | WP_000830838 | conjugal transfer pilus assembly protein TraU | traU |
| LT671_RS02265 (LT671_02260) | 14458..14763 | + | 306 | WP_000224411 | hypothetical protein | - |
| LT671_RS02270 (LT671_02265) | 14772..15410 | + | 639 | WP_001080257 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| LT671_RS02275 (LT671_02270) | 15407..17215 | + | 1809 | WP_000821863 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| LT671_RS02280 (LT671_02275) | 17242..17499 | + | 258 | WP_000864320 | conjugal transfer protein TrbE | - |
| LT671_RS02285 (LT671_02280) | 17492..18235 | + | 744 | WP_001030371 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| LT671_RS02290 (LT671_02285) | 18251..18589 | + | 339 | WP_001287905 | conjugal transfer protein TrbA | - |
| LT671_RS02295 (LT671_02290) | 18716..19000 | + | 285 | WP_001448202 | type-F conjugative transfer system pilin chaperone TraQ | - |
| LT671_RS02300 (LT671_02295) | 18987..19532 | + | 546 | WP_000059824 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| LT671_RS02305 (LT671_02300) | 19462..19803 | + | 342 | WP_001448115 | P-type conjugative transfer protein TrbJ | - |
| LT671_RS02310 (LT671_02305) | 19784..20176 | + | 393 | WP_000660703 | F-type conjugal transfer protein TrbF | - |
| LT671_RS02315 (LT671_02310) | 20163..21536 | + | 1374 | WP_001137364 | conjugal transfer pilus assembly protein TraH | traH |
| LT671_RS02320 (LT671_02315) | 21533..24352 | + | 2820 | WP_001007057 | conjugal transfer mating-pair stabilization protein TraG | traG |
| LT671_RS02325 (LT671_02320) | 24371..24868 | + | 498 | WP_000605861 | hypothetical protein | - |
| LT671_RS02330 (LT671_02325) | 24900..25631 | + | 732 | WP_000850422 | conjugal transfer complement resistance protein TraT | - |
| LT671_RS02335 (LT671_02330) | 25884..28055 | + | 2172 | WP_049077307 | type IV conjugative transfer system coupling protein TraD | - |