T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 31154..53988
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L5504_RS23895 (L5504_23900) | 26327..27451 | - | 1125 | WP_000486716 | site-specific integrase | - |
| L5504_RS24130 | 28908..29129 | + | 222 | Protein_33 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| L5504_RS23900 (L5504_23905) | 29126..30502 | - | 1377 | WP_247821998 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| L5504_RS23905 (L5504_23910) | 30515..31150 | - | 636 | WP_000934977 | A24 family peptidase | - |
| L5504_RS23910 (L5504_23915) | 31154..31636 | - | 483 | WP_001258095 | lytic transglycosylase domain-containing protein | virB1 |
| L5504_RS23915 (L5504_23920) | 31702..32259 | - | 558 | WP_000095048 | type 4 pilus major pilin | - |
| L5504_RS23920 (L5504_23925) | 32304..33413 | - | 1110 | WP_000974903 | type II secretion system F family protein | - |
| L5504_RS23925 (L5504_23930) | 33404..34942 | - | 1539 | WP_191647350 | GspE/PulE family protein | virB11 |
| L5504_RS23930 (L5504_23935) | 34967..35461 | - | 495 | WP_000912553 | type IV pilus biogenesis protein PilP | - |
| L5504_RS23935 (L5504_23940) | 35445..36755 | - | 1311 | WP_001454111 | type 4b pilus protein PilO2 | - |
| L5504_RS23940 (L5504_23945) | 36806..38449 | - | 1644 | WP_054173908 | PilN family type IVB pilus formation outer membrane protein | - |
| L5504_RS23945 (L5504_23950) | 38500..40458 | - | 1959 | WP_086354543 | type IV secretory system conjugative DNA transfer family protein | - |
| L5504_RS23950 (L5504_23955) | 40474..41529 | - | 1056 | WP_001059977 | P-type DNA transfer ATPase VirB11 | virB11 |
| L5504_RS23955 (L5504_23960) | 41548..42687 | - | 1140 | WP_000790641 | TrbI/VirB10 family protein | virB10 |
| L5504_RS23960 (L5504_23965) | 42677..43378 | - | 702 | WP_000274524 | TrbG/VirB9 family P-type conjugative transfer protein | virB9 |
| L5504_RS23965 (L5504_23970) | 43444..44178 | - | 735 | WP_000432283 | virB8 family protein | virB8 |
| L5504_RS23970 (L5504_23975) | 44178..44312 | - | 135 | WP_000701233 | hypothetical protein | - |
| L5504_RS23975 (L5504_23980) | 44344..46701 | - | 2358 | WP_000548950 | VirB4 family type IV secretion system protein | virb4 |
| L5504_RS23980 (L5504_23985) | 46707..47027 | - | 321 | WP_000362080 | VirB3 family type IV secretion system protein | virB3 |
| L5504_RS23985 (L5504_23990) | 47098..47388 | - | 291 | WP_000865479 | conjugal transfer protein | - |
| L5504_RS23990 (L5504_23995) | 47388..47972 | - | 585 | WP_001177114 | lytic transglycosylase domain-containing protein | virB1 |
| L5504_RS23995 (L5504_24000) | 47993..48391 | - | 399 | WP_001153668 | hypothetical protein | - |
| L5504_RS24000 (L5504_24005) | 48510..48947 | - | 438 | WP_000539665 | type IV pilus biogenesis protein PilM | - |
| L5504_RS24005 (L5504_24010) | 48953..50188 | - | 1236 | WP_021580486 | TcpQ domain-containing protein | - |
| L5504_RS24010 (L5504_24015) | 50191..50490 | - | 300 | WP_000835763 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| L5504_RS24015 (L5504_24020) | 50557..51192 | - | 636 | WP_000835765 | hypothetical protein | - |
| L5504_RS24020 (L5504_24025) | 51273..52031 | + | 759 | WP_224482110 | DUF5710 domain-containing protein | - |
| L5504_RS24025 (L5504_24030) | 52109..52345 | - | 237 | WP_000750964 | EexN family lipoprotein | - |
| L5504_RS24030 (L5504_24035) | 52349..52996 | - | 648 | WP_000653673 | type IV secretion system protein | - |
| L5504_RS24035 (L5504_24040) | 53002..53988 | - | 987 | WP_001028544 | type IV secretion system protein | virB6 |
| L5504_RS24040 (L5504_24045) | 53992..54249 | - | 258 | WP_000739144 | hypothetical protein | - |
| L5504_RS24045 (L5504_24050) | 54246..54548 | - | 303 | WP_001360345 | hypothetical protein | - |
| L5504_RS24050 (L5504_24055) | 54819..55265 | - | 447 | WP_001243164 | hypothetical protein | - |
| L5504_RS24055 (L5504_24060) | 55276..55446 | - | 171 | WP_000550720 | hypothetical protein | - |
| L5504_RS24060 (L5504_24065) | 55450..55893 | - | 444 | WP_000964331 | NfeD family protein | - |
| L5504_RS24065 (L5504_24070) | 56267..57220 | - | 954 | WP_072089442 | SPFH domain-containing protein | - |
| L5504_RS24070 (L5504_24075) | 57266..57460 | - | 195 | WP_001127356 | DUF1187 family protein | - |
| L5504_RS24075 (L5504_24080) | 57453..57905 | - | 453 | WP_000101552 | CaiF/GrlA family transcriptional regulator | - |