T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 34517..53620
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HKK50_RS00250 (pCTX-M3_048) | 29601..29912 | + | 312 | WP_011091065 | hypothetical protein | - |
| HKK50_RS00255 (pCTX-M3_049) | 30045..30581 | + | 537 | WP_011091066 | hypothetical protein | - |
| HKK50_RS00260 (pCTX-M3_050) | 31082..31447 | - | 366 | WP_011091067 | hypothetical protein | - |
| HKK50_RS00550 | 31462..32040 | + | 579 | WP_223811519 | plasmid mobilization protein MobA | - |
| HKK50_RS00270 (pCTX-M3_052) | 32027..34006 | + | 1980 | WP_050868819 | TraI/MobA(P) family conjugative relaxase | - |
| HKK50_RS00275 (pCTX-M3_053) | 34020..34520 | + | 501 | WP_004187320 | DotD/TraH family lipoprotein | - |
| HKK50_RS00280 (pCTX-M3_054) | 34517..35296 | + | 780 | WP_004187315 | type IV secretory system conjugative DNA transfer family protein | traI |
| HKK50_RS00285 (pCTX-M3_055) | 35307..36470 | + | 1164 | WP_004187313 | plasmid transfer ATPase TraJ | virB11 |
| HKK50_RS00290 (pCTX-M3_056) | 36460..36720 | + | 261 | WP_004187310 | IcmT/TraK family protein | traK |
| HKK50_RS00555 | 36745..39957 | + | 3213 | WP_011091070 | LPD7 domain-containing protein | - |
| HKK50_RS00300 (pCTX-M3_058) | 39881..40435 | + | 555 | WP_011154467 | hypothetical protein | traL |
| HKK50_RS00305 | 40436..40633 | - | 198 | WP_004187464 | Hha/YmoA family nucleoid-associated regulatory protein | - |
| HKK50_RS00310 | 40620..41030 | - | 411 | WP_004187465 | H-NS family nucleoid-associated regulatory protein | - |
| HKK50_RS00315 (pCTX-M3_060) | 41029..41811 | + | 783 | WP_011091073 | DotI/IcmL family type IV secretion protein | traM |
| HKK50_RS00320 (pCTX-M3_061) | 41820..42971 | + | 1152 | WP_011091074 | DotH/IcmK family type IV secretion protein | traN |
| HKK50_RS00325 (pCTX-M3_062) | 42983..44332 | + | 1350 | WP_011091075 | conjugal transfer protein TraO | traO |
| HKK50_RS00330 (pCTX-M3_063) | 44344..45048 | + | 705 | WP_011091076 | conjugal transfer protein TraP | traP |
| HKK50_RS00335 (pCTX-M3_064) | 45072..45602 | + | 531 | WP_011091077 | conjugal transfer protein TraQ | traQ |
| HKK50_RS00340 (pCTX-M3_065) | 45619..46008 | + | 390 | WP_011091078 | DUF6750 family protein | traR |
| HKK50_RS00345 (pCTX-M3_067) | 46054..46548 | + | 495 | WP_011091080 | hypothetical protein | - |
| HKK50_RS00350 (pCTX-M3_068) | 46545..49595 | + | 3051 | WP_011091081 | hypothetical protein | traU |
| HKK50_RS00355 (pCTX-M3_069) | 49592..50800 | + | 1209 | WP_011091082 | conjugal transfer protein TraW | traW |
| HKK50_RS00360 (pCTX-M3_070) | 50797..51447 | + | 651 | WP_011091083 | hypothetical protein | - |
| HKK50_RS00365 (pCTX-M3_071) | 51440..53620 | + | 2181 | WP_004187492 | DotA/TraY family protein | traY |
| HKK50_RS00370 (pCTX-M3_072) | 53623..54276 | + | 654 | WP_011091084 | hypothetical protein | - |
| HKK50_RS00375 (pCTX-M3_073) | 54333..54581 | + | 249 | WP_015062836 | IncL/M type plasmid replication protein RepC | - |
| HKK50_RS00380 (pCTX-M3_075) | 54867..55934 | + | 1068 | WP_050868820 | plasmid replication initiator RepA | - |
| HKK50_RS00385 (pCTX-M3_076) | 56938..57798 | - | 861 | WP_000027057 | broad-spectrum class A beta-lactamase TEM-1 | - |