T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 32575..41665
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D5F97_RS25120 (D5F97_25200) | 27838..28542 | + | 705 | WP_001067855 | IS6-like element IS26 family transposase | - |
| D5F97_RS25125 (D5F97_25205) | 28488..29069 | - | 582 | WP_058663077 | lipocalin family protein | - |
| D5F97_RS25130 (D5F97_25210) | 29163..30308 | - | 1146 | WP_000976514 | extended-spectrum class C beta-lactamase CMY-2 | - |
| D5F97_RS25135 (D5F97_25215) | 30632..31894 | - | 1263 | WP_000608644 | IS1380-like element ISEcp1 family transposase | - |
| D5F97_RS25140 (D5F97_25220) | 32179..32571 | - | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
| D5F97_RS25145 (D5F97_25225) | 32575..33153 | - | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
| D5F97_RS25150 (D5F97_25230) | 33150..34463 | - | 1314 | WP_024131605 | TraB/VirB10 family protein | traB |
| D5F97_RS25155 (D5F97_25235) | 34463..35380 | - | 918 | WP_000794249 | type-F conjugative transfer system secretin TraK | traK |
| D5F97_RS25160 (D5F97_25240) | 35364..35990 | - | 627 | WP_001049717 | TraE/TraK family type IV conjugative transfer system protein | traE |
| D5F97_RS25165 (D5F97_25245) | 35987..36268 | - | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
| D5F97_RS25170 (D5F97_25250) | 36413..36778 | - | 366 | WP_001052530 | hypothetical protein | - |
| D5F97_RS25175 (D5F97_25255) | 37114..37776 | - | 663 | WP_001231464 | hypothetical protein | - |
| D5F97_RS25180 (D5F97_25260) | 37776..38153 | - | 378 | WP_000869297 | hypothetical protein | - |
| D5F97_RS25185 (D5F97_25265) | 38163..38609 | - | 447 | WP_000122507 | hypothetical protein | - |
| D5F97_RS25190 (D5F97_25270) | 38619..39248 | - | 630 | WP_000743449 | DUF4400 domain-containing protein | tfc7 |
| D5F97_RS25195 (D5F97_25275) | 39205..39750 | - | 546 | WP_000228720 | hypothetical protein | - |
| D5F97_RS25200 (D5F97_25280) | 39800..41665 | - | 1866 | WP_077779971 | conjugative transfer system coupling protein TraD | virb4 |
| D5F97_RS25205 (D5F97_25285) | 41662..44634 | - | 2973 | WP_001326173 | MobH family relaxase | - |
| D5F97_RS25210 (D5F97_25290) | 44802..45419 | + | 618 | WP_001249395 | hypothetical protein | - |
| D5F97_RS25215 (D5F97_25295) | 45401..45634 | + | 234 | WP_001191890 | hypothetical protein | - |