T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 12514..21604
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D5F98_RS24835 (D5F98_24930) | 8545..8778 | - | 234 | WP_001191890 | hypothetical protein | - |
| D5F98_RS24840 (D5F98_24935) | 8760..9377 | - | 618 | WP_001249395 | hypothetical protein | - |
| D5F98_RS24845 (D5F98_24940) | 9545..12517 | + | 2973 | WP_001326173 | MobH family relaxase | - |
| D5F98_RS24850 (D5F98_24945) | 12514..14379 | + | 1866 | WP_077779971 | conjugative transfer system coupling protein TraD | virb4 |
| D5F98_RS24855 (D5F98_24950) | 14429..14974 | + | 546 | WP_000228720 | hypothetical protein | - |
| D5F98_RS24860 (D5F98_24955) | 14931..15560 | + | 630 | WP_000743449 | DUF4400 domain-containing protein | tfc7 |
| D5F98_RS24865 (D5F98_24960) | 15570..16016 | + | 447 | WP_000122507 | hypothetical protein | - |
| D5F98_RS24870 (D5F98_24965) | 16026..16403 | + | 378 | WP_000869297 | hypothetical protein | - |
| D5F98_RS24875 (D5F98_24970) | 16403..17065 | + | 663 | WP_001231464 | hypothetical protein | - |
| D5F98_RS24880 (D5F98_24975) | 17401..17766 | + | 366 | WP_001052530 | hypothetical protein | - |
| D5F98_RS24885 (D5F98_24980) | 17911..18192 | + | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
| D5F98_RS24890 (D5F98_24985) | 18189..18815 | + | 627 | WP_001049717 | TraE/TraK family type IV conjugative transfer system protein | traE |
| D5F98_RS24895 (D5F98_24990) | 18799..19716 | + | 918 | WP_000794249 | type-F conjugative transfer system secretin TraK | traK |
| D5F98_RS24900 (D5F98_24995) | 19716..21029 | + | 1314 | WP_024131605 | TraB/VirB10 family protein | traB |
| D5F98_RS24905 (D5F98_25000) | 21026..21604 | + | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
| D5F98_RS24910 (D5F98_25005) | 21608..22000 | + | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
| D5F98_RS24915 (D5F98_25010) | 22285..23547 | + | 1263 | WP_000608644 | IS1380-like element ISEcp1 family transposase | - |
| D5F98_RS24920 (D5F98_25015) | 23871..25016 | + | 1146 | WP_000976514 | extended-spectrum class C beta-lactamase CMY-2 | - |
| D5F98_RS24925 (D5F98_25020) | 25110..25691 | + | 582 | WP_058663077 | lipocalin family protein | - |
| D5F98_RS24930 (D5F98_25025) | 25637..26341 | - | 705 | WP_001067855 | IS6-like element IS26 family transposase | - |