T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 15804..24894
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D5F99_RS24875 (D5F99_24970) | 11835..12068 | - | 234 | WP_001191890 | hypothetical protein | - |
| D5F99_RS24880 (D5F99_24975) | 12050..12667 | - | 618 | WP_001249395 | hypothetical protein | - |
| D5F99_RS24885 (D5F99_24980) | 12835..15807 | + | 2973 | WP_001326173 | MobH family relaxase | - |
| D5F99_RS24890 (D5F99_24985) | 15804..17669 | + | 1866 | WP_000178857 | conjugative transfer system coupling protein TraD | virb4 |
| D5F99_RS24895 (D5F99_24990) | 17719..18264 | + | 546 | WP_000228720 | hypothetical protein | - |
| D5F99_RS24900 (D5F99_24995) | 18221..18850 | + | 630 | WP_000743449 | DUF4400 domain-containing protein | tfc7 |
| D5F99_RS24905 (D5F99_25000) | 18860..19306 | + | 447 | WP_000122507 | hypothetical protein | - |
| D5F99_RS24910 (D5F99_25005) | 19316..19693 | + | 378 | WP_000869297 | hypothetical protein | - |
| D5F99_RS24915 (D5F99_25010) | 19693..20355 | + | 663 | WP_001231464 | hypothetical protein | - |
| D5F99_RS24920 (D5F99_25015) | 20691..21056 | + | 366 | WP_001052530 | hypothetical protein | - |
| D5F99_RS24925 (D5F99_25020) | 21201..21482 | + | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
| D5F99_RS24930 (D5F99_25025) | 21479..22105 | + | 627 | WP_001049717 | TraE/TraK family type IV conjugative transfer system protein | traE |
| D5F99_RS24935 (D5F99_25030) | 22089..23006 | + | 918 | WP_000794249 | type-F conjugative transfer system secretin TraK | traK |
| D5F99_RS24940 (D5F99_25035) | 23006..24319 | + | 1314 | WP_024131605 | TraB/VirB10 family protein | traB |
| D5F99_RS24945 (D5F99_25040) | 24316..24894 | + | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
| D5F99_RS24950 (D5F99_25045) | 24898..25290 | + | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
| D5F99_RS24955 (D5F99_25050) | 25575..26837 | + | 1263 | WP_000608644 | IS1380-like element ISEcp1 family transposase | - |
| D5F99_RS24960 (D5F99_25055) | 27161..28306 | + | 1146 | WP_000976514 | extended-spectrum class C beta-lactamase CMY-2 | - |
| D5F99_RS24965 (D5F99_25060) | 28400..28933 | + | 534 | WP_001221666 | lipocalin family protein | - |
| D5F99_RS24970 (D5F99_25065) | 28930..29247 | - | 318 | WP_000118520 | quaternary ammonium compound efflux SMR transporter SugE | - |
| D5F99_RS26930 (D5F99_25070) | 29504..29869 | + | 366 | Protein_38 | LuxR family transcriptional regulator | - |