T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 1231508..1243523
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LDL63_RS32905 (LDL63_32905) | 1229847..1230341 | + | 495 | WP_256939196 | conjugative transfer signal peptidase TraF | - |
| LDL63_RS32910 (LDL63_32910) | 1230331..1231491 | + | 1161 | WP_218685708 | conjugal transfer protein TraB | - |
| LDL63_RS32915 (LDL63_32915) | 1231508..1232110 | + | 603 | WP_218685707 | TraH family protein | virB1 |
| LDL63_RS32920 (LDL63_32920) | 1232366..1232575 | - | 210 | WP_060529727 | helix-turn-helix domain-containing protein | - |
| LDL63_RS32925 (LDL63_32925) | 1232750..1233121 | + | 372 | WP_060585894 | transcriptional repressor TraM | - |
| LDL63_RS32930 (LDL63_32930) | 1233074..1233784 | - | 711 | WP_218685706 | autoinducer binding domain-containing protein | - |
| LDL63_RS32935 (LDL63_32935) | 1234049..1235332 | - | 1284 | WP_218685705 | IncP-type conjugal transfer protein TrbI | virB10 |
| LDL63_RS32940 (LDL63_32940) | 1235343..1235777 | - | 435 | WP_090428444 | conjugal transfer protein TrbH | - |
| LDL63_RS32945 (LDL63_32945) | 1235780..1236592 | - | 813 | WP_218685704 | P-type conjugative transfer protein TrbG | virB9 |
| LDL63_RS32950 (LDL63_32950) | 1236609..1237271 | - | 663 | WP_113293051 | conjugal transfer protein TrbF | virB8 |
| LDL63_RS32955 (LDL63_32955) | 1237287..1238468 | - | 1182 | WP_218685703 | P-type conjugative transfer protein TrbL | virB6 |
| LDL63_RS32960 (LDL63_32960) | 1238462..1238659 | - | 198 | WP_113293053 | entry exclusion protein TrbK | - |
| LDL63_RS32965 (LDL63_32965) | 1238656..1239459 | - | 804 | WP_218685702 | P-type conjugative transfer protein TrbJ | virB5 |
| LDL63_RS32970 (LDL63_32970) | 1239431..1241884 | - | 2454 | WP_218685701 | conjugal transfer protein TrbE | virb4 |
| LDL63_RS32975 (LDL63_32975) | 1241893..1242192 | - | 300 | WP_060529729 | conjugal transfer protein TrbD | virB3 |
| LDL63_RS32980 (LDL63_32980) | 1242185..1242556 | - | 372 | WP_060529730 | TrbC/VirB2 family protein | virB2 |
| LDL63_RS32985 (LDL63_32985) | 1242546..1243523 | - | 978 | WP_218685700 | P-type conjugative transfer ATPase TrbB | virB11 |
| LDL63_RS32990 (LDL63_32990) | 1243534..1244160 | - | 627 | WP_218685699 | acyl-homoserine-lactone synthase TraI | - |
| LDL63_RS32995 (LDL63_32995) | 1244518..1245750 | + | 1233 | WP_218685777 | plasmid partitioning protein RepA | - |
| LDL63_RS33000 (LDL63_33000) | 1245801..1246814 | + | 1014 | WP_218685698 | plasmid partitioning protein RepB | - |