T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 50862..59952
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R5P25_RS00350 (R5P25_00350) | 46893..47126 | - | 234 | WP_001191890 | hypothetical protein | - |
| R5P25_RS00355 (R5P25_00355) | 47108..47725 | - | 618 | WP_001249395 | hypothetical protein | - |
| R5P25_RS00360 (R5P25_00360) | 47893..50865 | + | 2973 | WP_001326173 | MobH family relaxase | - |
| R5P25_RS00365 (R5P25_00365) | 50862..52727 | + | 1866 | WP_000178857 | conjugative transfer system coupling protein TraD | virb4 |
| R5P25_RS00370 (R5P25_00370) | 52777..53322 | + | 546 | WP_000228720 | hypothetical protein | - |
| R5P25_RS00375 (R5P25_00375) | 53279..53908 | + | 630 | WP_000743449 | DUF4400 domain-containing protein | tfc7 |
| R5P25_RS00380 (R5P25_00380) | 53956..54132 | + | 177 | WP_169342285 | hypothetical protein | - |
| R5P25_RS00385 (R5P25_00385) | 54374..54751 | + | 378 | WP_000869297 | hypothetical protein | - |
| R5P25_RS00390 (R5P25_00390) | 54751..55413 | + | 663 | WP_001231464 | hypothetical protein | - |
| R5P25_RS00395 (R5P25_00395) | 55594..55737 | + | 144 | WP_001275801 | hypothetical protein | - |
| R5P25_RS00400 (R5P25_00400) | 55749..56114 | + | 366 | WP_001052530 | hypothetical protein | - |
| R5P25_RS00405 (R5P25_00405) | 56259..56540 | + | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
| R5P25_RS00410 (R5P25_00410) | 56537..57163 | + | 627 | WP_001049717 | TraE/TraK family type IV conjugative transfer system protein | traE |
| R5P25_RS00415 (R5P25_00415) | 57147..58064 | + | 918 | WP_000794249 | type-F conjugative transfer system secretin TraK | traK |
| R5P25_RS00420 (R5P25_00420) | 58064..59377 | + | 1314 | WP_024131605 | TraB/VirB10 family protein | traB |
| R5P25_RS00425 (R5P25_00425) | 59374..59952 | + | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
| R5P25_RS00430 (R5P25_00430) | 59956..60348 | + | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
| R5P25_RS00435 (R5P25_00435) | 60633..61895 | + | 1263 | WP_000608644 | IS1380-like element ISEcp1 family transposase | - |
| R5P25_RS00440 (R5P25_00440) | 62219..63364 | + | 1146 | WP_015058212 | class C beta-lactamase CMY-6 | - |
| R5P25_RS00445 (R5P25_00445) | 63458..63991 | + | 534 | WP_001221666 | lipocalin family protein | - |
| R5P25_RS00450 (R5P25_00450) | 63988..64305 | - | 318 | WP_000118520 | quaternary ammonium compound efflux SMR transporter SugE | - |
| R5P25_RS00455 (R5P25_00455) | 64562..64927 | + | 366 | Protein_90 | LuxR family transcriptional regulator | - |