T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 64683..73773
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JY390_RS21435 (JY390_21325) | 60714..60947 | - | 234 | WP_001191890 | hypothetical protein | - |
| JY390_RS21440 (JY390_21330) | 60929..61546 | - | 618 | WP_001249395 | hypothetical protein | - |
| JY390_RS21445 (JY390_21335) | 61714..64686 | + | 2973 | WP_001326173 | MobH family relaxase | - |
| JY390_RS21450 (JY390_21340) | 64683..66548 | + | 1866 | WP_000178857 | conjugative transfer system coupling protein TraD | virb4 |
| JY390_RS21455 (JY390_21345) | 66598..67143 | + | 546 | WP_000228720 | hypothetical protein | - |
| JY390_RS21460 (JY390_21350) | 67100..67729 | + | 630 | WP_000743449 | DUF4400 domain-containing protein | tfc7 |
| JY390_RS21465 (JY390_21355) | 67777..67953 | + | 177 | WP_169342285 | hypothetical protein | - |
| JY390_RS21470 (JY390_21360) | 68195..68572 | + | 378 | WP_000869297 | hypothetical protein | - |
| JY390_RS21475 (JY390_21365) | 68572..69234 | + | 663 | WP_001231464 | hypothetical protein | - |
| JY390_RS21480 (JY390_21370) | 69415..69558 | + | 144 | WP_001275801 | hypothetical protein | - |
| JY390_RS21485 (JY390_21375) | 69570..69935 | + | 366 | WP_001052530 | hypothetical protein | - |
| JY390_RS21490 (JY390_21380) | 70080..70361 | + | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
| JY390_RS21495 (JY390_21385) | 70358..70984 | + | 627 | WP_001049717 | TraE/TraK family type IV conjugative transfer system protein | traE |
| JY390_RS21500 (JY390_21390) | 70968..71885 | + | 918 | WP_000794249 | type-F conjugative transfer system secretin TraK | traK |
| JY390_RS21505 (JY390_21395) | 71885..73198 | + | 1314 | WP_024131605 | TraB/VirB10 family protein | traB |
| JY390_RS21510 (JY390_21400) | 73195..73773 | + | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
| JY390_RS21515 (JY390_21405) | 73777..74169 | + | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
| JY390_RS21520 (JY390_21410) | 74454..75716 | + | 1263 | WP_000608644 | IS1380-like element ISEcp1 family transposase | - |
| JY390_RS21525 (JY390_21415) | 76040..77185 | + | 1146 | WP_014386387 | class C beta-lactamase CMY-16 | - |
| JY390_RS21530 (JY390_21420) | 77279..77812 | + | 534 | WP_001221666 | lipocalin family protein | - |
| JY390_RS21535 (JY390_21425) | 77809..78126 | - | 318 | WP_000118520 | quaternary ammonium compound efflux SMR transporter SugE | - |
| JY390_RS21540 | 78383..78748 | + | 366 | Protein_109 | LuxR family transcriptional regulator | - |