T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 183877..193327
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ATU_RS23780 (AGR_pTi_290) | 179262..179993 | - | 732 | WP_010974913 | (dimethylallyl)adenosine tRNA methylthiotransferase | - |
| ATU_RS23785 (AGR_pTi_2) | 180831..183332 | + | 2502 | WP_010974914 | two-component system sensor kinase VirA | - |
| ATU_RS23790 (AGR_pTi_3) | 183877..184614 | + | 738 | WP_010974915 | type IV secretion system lytic transglycosylase VirB1 | virB1 |
| ATU_RS23795 (AGR_pTi_4) | 184614..184979 | + | 366 | WP_010891502 | pilin major subunit VirB2 | virB2 |
| ATU_RS23800 (AGR_pTi_bx137) | 184979..185305 | + | 327 | WP_010891501 | type IV secretion system protein VirB3 | virB3 |
| ATU_RS23805 (AGR_pTi_8) | 185305..187674 | + | 2370 | WP_010974916 | type IV secretion/conjugal transfer ATPase VirB4 | virb4 |
| ATU_RS23810 (AGR_pTi_9) | 187691..188353 | + | 663 | WP_010891499 | pilin minor subunit VirB5 | - |
| ATU_RS23815 (AGR_pTi_10) | 188454..189341 | + | 888 | WP_010974917 | type IV secretion system protein | virB6 |
| ATU_RS23820 (AGR_pTi_missing) | 189377..189544 | + | 168 | WP_010891497 | type IV secretion system lipoprotein VirB7 | - |
| ATU_RS23825 (AGR_pTi_11) | 189531..190244 | + | 714 | WP_010891496 | type IV secretion system protein VirB8 | virB8 |
| ATU_RS23830 (AGR_pTi_12) | 190241..191122 | + | 882 | WP_010891495 | P-type conjugative transfer protein VirB9 | virB9 |
| ATU_RS23835 (AGR_pTi_13) | 191119..192252 | + | 1134 | WP_010891494 | type IV secretion system protein VirB10 | virB10 |
| ATU_RS23840 (AGR_pTi_14) | 192293..193327 | + | 1035 | WP_010974918 | P-type DNA transfer ATPase VirB11 | virB11 |
| ATU_RS23845 (AGR_pTi_15) | 193546..194307 | + | 762 | WP_010891492 | two-component system response regulator VirG | - |
| ATU_RS23850 (AGR_pTi_16) | 194449..195057 | - | 609 | WP_010891491 | conjugal transfer protein VirC2 | - |
| ATU_RS23855 (AGR_pTi_18) | 195060..195755 | - | 696 | WP_010891490 | conjugal transfer ATPase VirC1 | - |
| ATU_RS23860 (AGR_pTi_19) | 196026..196469 | + | 444 | WP_010891489 | T-DNA border endonuclease subunit VirD1 | - |
| ATU_RS23865 (AGR_pTi_21) | 196503..197846 | + | 1344 | WP_010974919 | T-DNA border endonuclease VirD2 | - |