T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 15387..35469
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R2X29_RS00065 (R2X29_00065) | 11232..12665 | - | 1434 | WP_001288432 | DNA cytosine methyltransferase | - |
| R2X29_RS00070 (R2X29_00070) | 12764..13036 | + | 273 | Protein_13 | IS1 family transposase | - |
| R2X29_RS00075 (R2X29_00075) | 13047..13253 | - | 207 | WP_001749967 | hypothetical protein | - |
| R2X29_RS00080 (R2X29_00080) | 13258..13905 | - | 648 | WP_015344958 | restriction endonuclease | - |
| R2X29_RS00085 (R2X29_00085) | 13955..14266 | - | 312 | WP_001452736 | hypothetical protein | - |
| R2X29_RS00090 (R2X29_00090) | 14302..14616 | - | 315 | WP_001749965 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| R2X29_RS00095 (R2X29_00095) | 14613..14957 | - | 345 | WP_001749964 | hypothetical protein | - |
| R2X29_RS00100 (R2X29_00100) | 14973..15344 | - | 372 | WP_011867773 | H-NS family nucleoid-associated regulatory protein | - |
| R2X29_RS00105 (R2X29_00105) | 15387..16121 | + | 735 | WP_001749963 | lytic transglycosylase domain-containing protein | virB1 |
| R2X29_RS00110 (R2X29_00110) | 16130..16411 | + | 282 | WP_000440698 | transcriptional repressor KorA | - |
| R2X29_RS00115 (R2X29_00115) | 16421..16714 | + | 294 | WP_001749962 | hypothetical protein | virB2 |
| R2X29_RS00120 (R2X29_00120) | 16764..17081 | + | 318 | WP_000496058 | VirB3 family type IV secretion system protein | virB3 |
| R2X29_RS00125 (R2X29_00125) | 17081..19681 | + | 2601 | WP_001749961 | VirB4 family type IV secretion/conjugal transfer ATPase | virb4 |
| R2X29_RS00130 (R2X29_00130) | 19699..20412 | + | 714 | WP_001749960 | type IV secretion system protein | virB5 |
| R2X29_RS00135 (R2X29_00135) | 20420..20647 | + | 228 | WP_001749959 | IncN-type entry exclusion lipoprotein EexN | - |
| R2X29_RS00140 (R2X29_00140) | 20663..21703 | + | 1041 | WP_001749958 | type IV secretion system protein | virB6 |
| R2X29_RS00145 (R2X29_00145) | 21786..21932 | + | 147 | WP_001257173 | conjugal transfer protein TraN | - |
| R2X29_RS00150 (R2X29_00150) | 21922..22620 | + | 699 | WP_000646594 | virB8 family protein | virB8 |
| R2X29_RS00155 (R2X29_00155) | 22631..23515 | + | 885 | WP_000735066 | TrbG/VirB9 family P-type conjugative transfer protein | virB9 |
| R2X29_RS00160 (R2X29_00160) | 23515..24675 | + | 1161 | WP_000101710 | type IV secretion system protein VirB10 | virB10 |
| R2X29_RS00165 (R2X29_00165) | 24717..25712 | + | 996 | WP_000128596 | ATPase, T2SS/T4P/T4SS family | virB11 |
| R2X29_RS00170 (R2X29_00170) | 25712..26245 | + | 534 | WP_000792636 | phospholipase D family protein | - |
| R2X29_RS00175 (R2X29_00175) | 26419..26706 | - | 288 | Protein_34 | DUF6710 family protein | - |
| R2X29_RS00180 (R2X29_00180) | 26973..27152 | + | 180 | Protein_35 | helix-turn-helix domain-containing protein | - |
| R2X29_RS00185 (R2X29_00185) | 27217..27921 | + | 705 | WP_001067855 | IS6-like element IS26 family transposase | - |
| R2X29_RS00190 (R2X29_00190) | 27975..28606 | - | 632 | Protein_37 | transposase | - |
| R2X29_RS00195 (R2X29_00195) | 29001..29657 | + | 657 | WP_001516695 | quinolone resistance pentapeptide repeat protein QnrS1 | - |
| R2X29_RS00200 (R2X29_00200) | 29976..30590 | - | 615 | WP_014839983 | recombinase family protein | - |
| R2X29_RS00205 (R2X29_00205) | 30752..30934 | + | 183 | Protein_40 | DUF4158 domain-containing protein | - |
| R2X29_RS00210 (R2X29_00210) | 31070..31615 | + | 546 | WP_001493763 | plasmid pRiA4b ORF-3 family protein | - |
| R2X29_RS00215 (R2X29_00215) | 31752..32324 | + | 573 | WP_001493762 | recombinase family protein | - |
| R2X29_RS00220 (R2X29_00220) | 32361..33752 | + | 1392 | WP_014839878 | ISKra4-like element ISKpn19 family transposase | - |
| R2X29_RS00225 (R2X29_00225) | 33716..33940 | - | 225 | WP_284246358 | relaxase domain-containing protein | - |
| R2X29_RS00230 (R2X29_00230) | 33940..35469 | - | 1530 | WP_000342688 | type IV secretion system DNA-binding domain-containing protein | virb4 |
| R2X29_RS00235 (R2X29_00235) | 35471..35761 | - | 291 | WP_000706094 | hypothetical protein | - |
| R2X29_RS00240 (R2X29_00240) | 36378..36797 | + | 420 | WP_001749974 | plasmid stabilization protein StbA | - |
| R2X29_RS00245 (R2X29_00245) | 36806..37522 | + | 717 | WP_001749973 | StbB family protein | - |
| R2X29_RS00250 (R2X29_00250) | 37524..37892 | + | 369 | WP_000414913 | plasmid stabilization protein StbC | - |
| R2X29_RS00255 (R2X29_00255) | 38074..38418 | + | 345 | WP_000999874 | hypothetical protein | - |
| R2X29_RS00260 (R2X29_00260) | 38529..38849 | - | 321 | WP_001749971 | protein CcgAII | - |
| R2X29_RS00265 (R2X29_00265) | 38904..39083 | - | 180 | WP_000214483 | protein CcgAI | - |
| R2X29_RS00270 (R2X29_00270) | 39810..40319 | - | 510 | WP_000129958 | antirestriction protein ArdA | - |