T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 2429..11636
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IFA78_RS00005 (CDHFNHMB_00001) | 1..876 | + | 876 | WP_000594612 | RepB family plasmid replication initiator protein | - |
| IFA78_RS00010 (CDHFNHMB_00004) | 2025..2378 | + | 354 | WP_000423602 | hypothetical protein | - |
| IFA78_RS00015 (CDHFNHMB_00005) | 2429..2746 | + | 318 | WP_000043357 | type IV conjugative transfer system protein TraL | traL |
| IFA78_RS00020 (CDHFNHMB_00006) | 2758..3546 | + | 789 | WP_000783153 | TraE/TraK family type IV conjugative transfer system protein | traE |
| IFA78_RS00025 (CDHFNHMB_00007) | 3546..4817 | + | 1272 | WP_000592090 | type-F conjugative transfer system secretin TraK | traK |
| IFA78_RS00030 (CDHFNHMB_00008) | 4819..5280 | + | 462 | WP_000521240 | plasmid transfer protein HtdO | - |
| IFA78_RS00035 (CDHFNHMB_00009) | 5270..6625 | + | 1356 | WP_000351841 | IncHI-type conjugal transfer protein TrhB | traB |
| IFA78_RS00040 (CDHFNHMB_00010) | 6633..7115 | + | 483 | WP_000377633 | hypothetical protein | - |
| IFA78_RS00045 (CDHFNHMB_00011) | 7234..7986 | + | 753 | WP_183079335 | protein-disulfide isomerase HtdT | - |
| IFA78_RS00050 (CDHFNHMB_00012) | 7996..8946 | + | 951 | WP_001022587 | IncHI-type conjugal transfer lipoprotein TrhV | traV |
| IFA78_RS00055 (CDHFNHMB_00013) | 8955..11636 | + | 2682 | WP_000387412 | TraC family protein | virb4 |