T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 186798..225687
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| APL92_RS24855 | 181860..182927 | + | 1068 | WP_001360287 | type IV pilus biogenesis lipoprotein PilL | - |
| APL92_RS24860 (APL92_23745) | 182927..183364 | + | 438 | WP_000539807 | type IV pilus biogenesis protein PilM | - |
| APL92_RS24865 (APL92_23750) | 183378..185060 | + | 1683 | WP_000748143 | PilN family type IVB pilus formation outer membrane protein | - |
| APL92_RS24870 (APL92_23755) | 185053..186348 | + | 1296 | WP_058649964 | type 4b pilus protein PilO2 | - |
| APL92_RS24875 (APL92_23760) | 186335..186787 | + | 453 | WP_058649963 | type IV pilus biogenesis protein PilP | - |
| APL92_RS24880 (APL92_23765) | 186798..188351 | + | 1554 | WP_000362204 | GspE/PulE family protein | virB11 |
| APL92_RS24885 (APL92_23770) | 188364..189449 | + | 1086 | WP_001208803 | type II secretion system F family protein | - |
| APL92_RS24890 (APL92_23775) | 189466..190080 | + | 615 | WP_000908228 | type 4 pilus major pilin | - |
| APL92_RS24895 (APL92_23780) | 190090..190650 | + | 561 | WP_000014005 | lytic transglycosylase domain-containing protein | virB1 |
| APL92_RS24900 (APL92_23785) | 190635..191291 | + | 657 | WP_001193551 | A24 family peptidase | - |
| APL92_RS24905 (APL92_23790) | 191291..192583 | + | 1293 | WP_039719938 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| APL92_RS26760 | 192580..192828 | - | 249 | WP_001349157 | hypothetical protein | - |
| APL92_RS24920 (APL92_23795) | 193518..194672 | + | 1155 | WP_001139955 | tyrosine-type recombinase/integrase | - |
| APL92_RS24925 (APL92_23800) | 194823..195647 | + | 825 | WP_058649947 | conjugal transfer protein TraE | traE |
| APL92_RS24930 (APL92_23805) | 195733..196935 | + | 1203 | WP_000976353 | conjugal transfer protein TraF | - |
| APL92_RS24935 (APL92_23810) | 196995..197579 | + | 585 | WP_000977520 | histidine phosphatase family protein | - |
| APL92_RS24940 (APL92_23815) | 197974..198432 | + | 459 | WP_001079808 | IncI1-type conjugal transfer lipoprotein TraH | - |
| APL92_RS24945 (APL92_23820) | 198429..199247 | + | 819 | WP_000646097 | IncI1-type conjugal transfer lipoprotein TraI | traI |
| APL92_RS24950 (APL92_23825) | 199244..200392 | + | 1149 | WP_001024976 | plasmid transfer ATPase TraJ | virB11 |
| APL92_RS24955 | 200389..200679 | + | 291 | WP_001299214 | hypothetical protein | traK |
| APL92_RS24960 (APL92_23830) | 200694..201245 | + | 552 | WP_000014584 | phospholipase D family protein | - |
| APL92_RS24965 (APL92_23835) | 201335..205102 | + | 3768 | WP_058649948 | LPD7 domain-containing protein | - |
| APL92_RS24970 (APL92_23840) | 205120..205467 | + | 348 | WP_001055900 | conjugal transfer protein | traL |
| APL92_RS24975 (APL92_23845) | 205464..206156 | + | 693 | WP_000138552 | DotI/IcmL family type IV secretion protein | traM |
| APL92_RS24980 (APL92_23850) | 206167..207150 | + | 984 | WP_021513963 | IncI1-type conjugal transfer protein TraN | traN |
| APL92_RS24985 (APL92_23855) | 207153..208442 | + | 1290 | WP_001271994 | conjugal transfer protein TraO | traO |
| APL92_RS24990 (APL92_23860) | 208442..209146 | + | 705 | WP_023155244 | IncI1-type conjugal transfer protein TraP | traP |
| APL92_RS24995 (APL92_23865) | 209146..209673 | + | 528 | WP_001055569 | conjugal transfer protein TraQ | traQ |
| APL92_RS25000 (APL92_23870) | 209724..210128 | + | 405 | WP_000086960 | IncI1-type conjugal transfer protein TraR | traR |
| APL92_RS25005 (APL92_23875) | 210192..210380 | + | 189 | WP_001277255 | putative conjugal transfer protein TraS | - |
| APL92_RS25010 (APL92_23880) | 210364..211164 | + | 801 | WP_001164792 | IncI1-type conjugal transfer protein TraT | traT |
| APL92_RS25015 (APL92_23885) | 211254..214298 | + | 3045 | WP_001024776 | IncI1-type conjugal transfer protein TraU | traU |
| APL92_RS25020 | 214298..214912 | + | 615 | WP_000337399 | IncI1-type conjugal transfer protein TraV | traV |
| APL92_RS25025 (APL92_23890) | 214879..216081 | + | 1203 | WP_001189156 | IncI1-type conjugal transfer protein TraW | traW |
| APL92_RS25030 (APL92_23895) | 216110..216694 | + | 585 | WP_001037996 | IncI1-type conjugal transfer protein TraX | - |
| APL92_RS25035 (APL92_23900) | 216791..218959 | + | 2169 | WP_058649949 | DotA/TraY family protein | traY |
| APL92_RS25040 (APL92_23905) | 219030..219692 | + | 663 | WP_000644796 | plasmid IncI1-type surface exclusion protein ExcA | - |
| APL92_RS25045 (APL92_23910) | 219764..219973 | - | 210 | WP_000062603 | HEAT repeat domain-containing protein | - |
| APL92_RS26765 | 220365..220541 | + | 177 | WP_001054897 | hypothetical protein | - |
| APL92_RS27235 | 220606..220701 | - | 96 | WP_000609148 | DinQ-like type I toxin DqlB | - |
| APL92_RS25055 (APL92_23920) | 221202..221453 | + | 252 | WP_001291964 | hypothetical protein | - |
| APL92_RS25060 (APL92_23925) | 221525..221677 | - | 153 | WP_001387489 | Hok/Gef family protein | - |
| APL92_RS25065 (APL92_23930) | 222304..223083 | + | 780 | WP_275450201 | protein FinQ | - |
| APL92_RS25070 (APL92_23935) | 223390..224598 | + | 1209 | WP_001383960 | IncI1-type conjugal transfer protein TrbA | trbA |
| APL92_RS25075 (APL92_23940) | 224617..225687 | + | 1071 | WP_000151583 | IncI1-type conjugal transfer protein TrbB | trbB |
| APL92_RS25080 (APL92_23945) | 225680..227971 | + | 2292 | WP_001289275 | F-type conjugative transfer protein TrbC | - |