T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 35769..74683
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R1243_RS24080 (R1243_24080) | 33485..35776 | - | 2292 | WP_011264051 | F-type conjugative transfer protein TrbC | - |
| R1243_RS24085 (R1243_24085) | 35769..36839 | - | 1071 | WP_000151583 | IncI1-type conjugal transfer protein TrbB | trbB |
| R1243_RS24090 (R1243_24090) | 36858..38066 | - | 1209 | WP_001383960 | IncI1-type conjugal transfer protein TrbA | trbA |
| R1243_RS24095 (R1243_24095) | 38284..39270 | - | 987 | WP_001257838 | hypothetical protein | - |
| R1243_RS24100 (R1243_24100) | 39543..39695 | + | 153 | WP_001331364 | Hok/Gef family protein | - |
| R1243_RS24105 (R1243_24105) | 39767..40018 | - | 252 | WP_001291964 | hypothetical protein | - |
| R1243_RS24110 (R1243_24110) | 40517..40612 | + | 96 | WP_001303310 | DinQ-like type I toxin DqlB | - |
| R1243_RS24115 (R1243_24115) | 40677..40853 | - | 177 | WP_001054900 | hypothetical protein | - |
| R1243_RS24120 (R1243_24120) | 41185..41394 | + | 210 | WP_000062602 | HEAT repeat domain-containing protein | - |
| R1243_RS24125 (R1243_24125) | 41466..42128 | - | 663 | WP_317361617 | plasmid IncI1-type surface exclusion protein ExcA | - |
| R1243_RS24130 (R1243_24130) | 42193..44361 | - | 2169 | WP_077250315 | DotA/TraY family protein | traY |
| R1243_RS24135 (R1243_24135) | 44458..45042 | - | 585 | WP_001037996 | IncI1-type conjugal transfer protein TraX | - |
| R1243_RS24140 (R1243_24140) | 45071..46273 | - | 1203 | WP_001189156 | IncI1-type conjugal transfer protein TraW | traW |
| R1243_RS24145 (R1243_24145) | 46240..46854 | - | 615 | WP_000337399 | IncI1-type conjugal transfer protein TraV | traV |
| R1243_RS24150 (R1243_24150) | 46854..49898 | - | 3045 | WP_001024776 | IncI1-type conjugal transfer protein TraU | traU |
| R1243_RS24155 (R1243_24155) | 49988..50788 | - | 801 | WP_001164792 | IncI1-type conjugal transfer protein TraT | traT |
| R1243_RS24160 (R1243_24160) | 50772..50960 | - | 189 | WP_001277255 | putative conjugal transfer protein TraS | - |
| R1243_RS24165 (R1243_24165) | 51024..51428 | - | 405 | WP_000086960 | IncI1-type conjugal transfer protein TraR | traR |
| R1243_RS24170 (R1243_24170) | 51479..52006 | - | 528 | WP_001055569 | conjugal transfer protein TraQ | traQ |
| R1243_RS24175 (R1243_24175) | 52006..52710 | - | 705 | WP_023155244 | IncI1-type conjugal transfer protein TraP | traP |
| R1243_RS24180 (R1243_24180) | 52710..53999 | - | 1290 | WP_001271994 | conjugal transfer protein TraO | traO |
| R1243_RS24185 (R1243_24185) | 54002..54985 | - | 984 | WP_021513963 | IncI1-type conjugal transfer protein TraN | traN |
| R1243_RS24190 (R1243_24190) | 54996..55688 | - | 693 | WP_000138552 | DotI/IcmL family type IV secretion protein | traM |
| R1243_RS24195 (R1243_24195) | 55685..56032 | - | 348 | WP_001055900 | conjugal transfer protein | traL |
| R1243_RS24200 (R1243_24200) | 56050..59817 | - | 3768 | WP_006855639 | LPD7 domain-containing protein | - |
| R1243_RS24205 (R1243_24205) | 59907..60458 | - | 552 | WP_000014584 | phospholipase D family protein | - |
| R1243_RS24210 (R1243_24210) | 60473..60763 | - | 291 | WP_001299214 | hypothetical protein | traK |
| R1243_RS24215 (R1243_24215) | 60760..61908 | - | 1149 | WP_001024976 | plasmid transfer ATPase TraJ | virB11 |
| R1243_RS24220 (R1243_24220) | 61905..62723 | - | 819 | WP_000646097 | IncI1-type conjugal transfer lipoprotein TraI | traI |
| R1243_RS24225 (R1243_24225) | 62720..63178 | - | 459 | WP_001079808 | IncI1-type conjugal transfer lipoprotein TraH | - |
| R1243_RS24230 (R1243_24230) | 63573..64157 | - | 585 | WP_000977520 | histidine phosphatase family protein | - |
| R1243_RS24235 (R1243_24235) | 64217..65419 | - | 1203 | WP_000976357 | conjugal transfer protein TraF | - |
| R1243_RS24240 (R1243_24240) | 65505..66329 | - | 825 | WP_015058912 | conjugal transfer protein TraE | traE |
| R1243_RS24245 (R1243_24245) | 66480..67634 | - | 1155 | WP_001139955 | tyrosine-type recombinase/integrase | - |
| R1243_RS24250 (R1243_24250) | 68898..70190 | - | 1293 | WP_039719938 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| R1243_RS24255 (R1243_24255) | 70190..70846 | - | 657 | WP_001193551 | A24 family peptidase | - |
| R1243_RS24260 (R1243_24260) | 70831..71391 | - | 561 | WP_000014005 | lytic transglycosylase domain-containing protein | virB1 |
| R1243_RS24265 (R1243_24265) | 71401..72015 | - | 615 | WP_000908228 | type 4 pilus major pilin | - |
| R1243_RS24270 (R1243_24270) | 72032..73117 | - | 1086 | WP_001208803 | type II secretion system F family protein | - |
| R1243_RS24275 (R1243_24275) | 73130..74683 | - | 1554 | WP_000362204 | GspE/PulE family protein | virB11 |
| R1243_RS24280 (R1243_24280) | 74694..75146 | - | 453 | WP_001247333 | type IV pilus biogenesis protein PilP | - |
| R1243_RS24285 (R1243_24285) | 75133..76428 | - | 1296 | WP_058649964 | type 4b pilus protein PilO2 | - |
| R1243_RS24290 (R1243_24290) | 76421..78103 | - | 1683 | WP_000748143 | PilN family type IVB pilus formation outer membrane protein | - |
| R1243_RS24295 (R1243_24295) | 78117..78554 | - | 438 | WP_000539811 | type IV pilus biogenesis protein PilM | - |
| R1243_RS24300 (R1243_24300) | 78554..79621 | - | 1068 | WP_021513968 | type IV pilus biogenesis lipoprotein PilL | - |