T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 621..18410
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R1243_RS23535 (R1243_23535) | 281..628 | + | 348 | WP_001139329 | hypothetical protein | - |
| R1243_RS23540 (R1243_23540) | 621..2198 | + | 1578 | WP_001001035 | type IV secretion system DNA-binding domain-containing protein | virb4 |
| R1243_RS23545 (R1243_23545) | 2201..5110 | + | 2910 | WP_000932317 | MobF family relaxase | - |
| R1243_RS23550 (R1243_23550) | 5388..5582 | - | 195 | WP_000529710 | hypothetical protein | - |
| R1243_RS23555 (R1243_23555) | 5594..6088 | - | 495 | WP_050868853 | GNAT family N-acetyltransferase | - |
| R1243_RS23560 (R1243_23560) | 6089..6643 | - | 555 | WP_000616063 | phospholipase D family protein | - |
| R1243_RS23565 (R1243_23565) | 6606..7637 | - | 1032 | WP_000138004 | P-type DNA transfer ATPase VirB11 | virB11 |
| R1243_RS23570 (R1243_23570) | 7630..8784 | - | 1155 | WP_001224296 | type IV secretion system protein VirB10 | virB10 |
| R1243_RS23575 (R1243_23575) | 8781..9668 | - | 888 | WP_000744355 | TrbG/VirB9 family P-type conjugative transfer protein | virB9 |
| R1243_RS23580 (R1243_23580) | 9671..10387 | - | 717 | WP_000914645 | virB8 family protein | virB8 |
| R1243_RS23585 (R1243_23585) | 10390..10560 | - | 171 | WP_021536809 | hypothetical protein | - |
| R1243_RS23590 (R1243_23590) | 10655..11698 | - | 1044 | WP_021536808 | type IV secretion system protein | virB6 |
| R1243_RS23595 (R1243_23595) | 11717..11953 | - | 237 | WP_000733633 | EexN family lipoprotein | - |
| R1243_RS23600 (R1243_23600) | 11957..12664 | - | 708 | WP_108714636 | type IV secretion system protein | virB5 |
| R1243_RS23605 (R1243_23605) | 12674..14947 | - | 2274 | WP_225386901 | VirB4 family type IV secretion/conjugal transfer ATPase | virb4 |
| R1243_RS23610 (R1243_23610) | 15304..15618 | - | 315 | WP_001053888 | type IV secretion system protein VirB3 | virB3 |
| R1243_RS23615 (R1243_23615) | 15668..15958 | - | 291 | WP_114266869 | TrbC/VirB2 family protein | virB2 |
| R1243_RS23620 (R1243_23620) | 15942..16259 | - | 318 | WP_001267114 | hypothetical protein | - |
| R1243_RS23625 (R1243_23625) | 16282..17022 | - | 741 | WP_000815895 | lytic transglycosylase domain-containing protein | virB1 |
| R1243_RS23630 (R1243_23630) | 17085..17321 | + | 237 | WP_000089855 | H-NS family nucleoid-associated regulatory protein | - |
| R1243_RS23635 (R1243_23635) | 17333..17770 | + | 438 | WP_108714638 | hypothetical protein | - |
| R1243_RS23640 (R1243_23640) | 17869..18093 | + | 225 | WP_317361516 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| R1243_RS23645 (R1243_23645) | 18096..18410 | + | 315 | WP_023223516 | hypothetical protein | tfc15 |
| R1243_RS23650 (R1243_23650) | 18386..19111 | + | 726 | WP_225386900 | restriction endonuclease | - |
| R1243_RS23655 (R1243_23655) | 19277..19513 | + | 237 | WP_042041953 | Hha/YmoA family nucleoid-associated regulatory protein | - |
| R1243_RS23660 (R1243_23660) | 19539..19976 | - | 438 | WP_060628251 | hypothetical protein | - |
| R1243_RS23665 (R1243_23665) | 19985..20311 | - | 327 | WP_016240388 | endoribonuclease MazF | - |
| R1243_RS23670 (R1243_23670) | 20301..20558 | - | 258 | WP_108714640 | hypothetical protein | - |
| R1243_RS23675 (R1243_23675) | 20570..20815 | - | 246 | WP_021536799 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| R1243_RS23680 (R1243_23680) | 21267..21851 | + | 585 | WP_021536796 | recombinase family protein | - |
| R1243_RS23685 (R1243_23685) | 21884..22768 | + | 885 | WP_023187082 | replication protein RepA | - |