T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 18029..28354
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R1018_RS22080 (R1018_22080) | 13256..13801 | + | 546 | WP_001493763 | plasmid pRiA4b ORF-3 family protein | - |
| R1018_RS22085 (R1018_22085) | 13938..14510 | + | 573 | WP_001493762 | recombinase family protein | - |
| R1018_RS22090 (R1018_22090) | 14547..15938 | + | 1392 | WP_014839878 | ISKra4-like element ISKpn19 family transposase | - |
| R1018_RS22095 (R1018_22095) | 16097..16794 | + | 698 | WP_095033700 | IS1-like element IS1B family transposase | - |
| R1018_RS22100 (R1018_22100) | 17035..17322 | + | 288 | Protein_18 | DUF6710 family protein | - |
| R1018_RS22105 (R1018_22105) | 17496..18029 | - | 534 | WP_000792636 | phospholipase D family protein | - |
| R1018_RS22110 (R1018_22110) | 18029..19024 | - | 996 | WP_000128596 | ATPase, T2SS/T4P/T4SS family | virB11 |
| R1018_RS22115 (R1018_22115) | 19066..20226 | - | 1161 | WP_000101710 | type IV secretion system protein VirB10 | virB10 |
| R1018_RS22120 (R1018_22120) | 20226..21110 | - | 885 | WP_000735066 | TrbG/VirB9 family P-type conjugative transfer protein | virB9 |
| R1018_RS22125 (R1018_22125) | 21121..21819 | - | 699 | WP_000646594 | virB8 family protein | virB8 |
| R1018_RS22130 (R1018_22130) | 22038..23078 | - | 1041 | WP_001749958 | type IV secretion system protein | virB6 |
| R1018_RS22135 (R1018_22135) | 23094..23321 | - | 228 | WP_001749959 | IncN-type entry exclusion lipoprotein EexN | - |
| R1018_RS22140 (R1018_22140) | 23329..24042 | - | 714 | WP_001749960 | type IV secretion system protein | virB5 |
| R1018_RS22145 (R1018_22145) | 24060..26528 | - | 2469 | WP_224743086 | VirB4 family type IV secretion/conjugal transfer ATPase | virb4 |
| R1018_RS22150 (R1018_22150) | 26660..26977 | - | 318 | WP_000496058 | VirB3 family type IV secretion system protein | virB3 |
| R1018_RS22155 (R1018_22155) | 27027..27320 | - | 294 | WP_001749962 | hypothetical protein | virB2 |
| R1018_RS22160 (R1018_22160) | 27330..27611 | - | 282 | WP_000440698 | transcriptional repressor KorA | - |
| R1018_RS22165 (R1018_22165) | 27620..28354 | - | 735 | WP_001749963 | lytic transglycosylase domain-containing protein | virB1 |
| R1018_RS22170 (R1018_22170) | 28397..28768 | + | 372 | WP_011867773 | H-NS family nucleoid-associated regulatory protein | - |
| R1018_RS22175 (R1018_22175) | 28784..29128 | + | 345 | WP_001749964 | hypothetical protein | - |
| R1018_RS22180 (R1018_22180) | 29125..29439 | + | 315 | WP_001749965 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| R1018_RS22185 (R1018_22185) | 29475..29786 | + | 312 | WP_001452736 | hypothetical protein | - |
| R1018_RS22190 (R1018_22190) | 29836..30483 | + | 648 | WP_015344958 | restriction endonuclease | - |
| R1018_RS22195 (R1018_22195) | 30488..30694 | + | 207 | WP_001749967 | hypothetical protein | - |
| R1018_RS22200 (R1018_22200) | 30705..30977 | - | 273 | Protein_38 | IS1 family transposase | - |
| R1018_RS22205 (R1018_22205) | 31076..32509 | + | 1434 | WP_001288432 | DNA cytosine methyltransferase | - |