T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 24987..51415
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RX585_RS24050 (RX585_24045) | 24353..24580 | + | 228 | WP_000450265 | toxin-antitoxin system antitoxin VapB | - |
| RX585_RS24055 (RX585_24050) | 24580..24978 | + | 399 | WP_000911322 | type II toxin-antitoxin system VapC family toxin | - |
| RX585_RS24060 (RX585_24055) | 24987..27221 | - | 2235 | WP_000009319 | type IV conjugative transfer system coupling protein TraD | virb4 |
| RX585_RS24065 (RX585_24060) | 27598..28329 | - | 732 | WP_000782438 | conjugal transfer complement resistance protein TraT | - |
| RX585_RS24070 (RX585_24065) | 28365..28859 | - | 495 | WP_010999946 | entry exclusion protein | - |
| RX585_RS24075 (RX585_24070) | 28875..31697 | - | 2823 | WP_001007086 | conjugal transfer mating-pair stabilization protein TraG | traG |
| RX585_RS24080 (RX585_24075) | 31694..33076 | - | 1383 | WP_001161719 | conjugal transfer pilus assembly protein TraH | traH |
| RX585_RS24085 (RX585_24080) | 33066..33614 | - | 549 | WP_000055840 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| RX585_RS24090 (RX585_24085) | 33601..33894 | - | 294 | WP_001233881 | type-F conjugative transfer system pilin chaperone TraQ | - |
| RX585_RS24095 (RX585_24090) | 34108..34857 | - | 750 | WP_001226854 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| RX585_RS24100 (RX585_24095) | 34869..35084 | - | 216 | WP_000700023 | conjugal transfer protein TrbE | - |
| RX585_RS24105 (RX585_24100) | 35095..36921 | - | 1827 | WP_000827528 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| RX585_RS24110 (RX585_24105) | 36918..37337 | - | 420 | WP_001229397 | HNH endonuclease | - |
| RX585_RS24115 (RX585_24110) | 37374..38012 | - | 639 | WP_000554823 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| RX585_RS24120 (RX585_24115) | 37997..38305 | - | 309 | WP_010999945 | hypothetical protein | - |
| RX585_RS24125 (RX585_24120) | 38324..39316 | - | 993 | WP_000833320 | conjugal transfer pilus assembly protein TraU | traU |
| RX585_RS24130 (RX585_24125) | 39313..39945 | - | 633 | WP_000871995 | type-F conjugative transfer system protein TraW | traW |
| RX585_RS24135 (RX585_24130) | 39942..40328 | - | 387 | WP_000105164 | type-F conjugative transfer system protein TrbI | - |
| RX585_RS24140 (RX585_24135) | 40303..42951 | - | 2649 | WP_000793310 | type IV secretion system protein TraC | virb4 |
| RX585_RS24145 (RX585_24140) | 42967..43230 | - | 264 | WP_001239256 | hypothetical protein | - |
| RX585_RS24150 (RX585_24145) | 43347..43814 | - | 468 | WP_000549562 | hypothetical protein | - |
| RX585_RS24155 (RX585_24150) | 43807..44028 | - | 222 | WP_001278699 | conjugal transfer protein TraR | - |
| RX585_RS24160 (RX585_24155) | 44163..44678 | - | 516 | WP_001079995 | type IV conjugative transfer system lipoprotein TraV | traV |
| RX585_RS24165 (RX585_24160) | 44675..44920 | - | 246 | WP_010999944 | DUF2689 domain-containing protein | virb4 |
| RX585_RS24170 (RX585_24165) | 44898..45494 | - | 597 | Protein_51 | conjugal transfer pilus-stabilizing protein TraP | - |
| RX585_RS24175 (RX585_24170) | 45484..46905 | - | 1422 | WP_000146700 | F-type conjugal transfer pilus assembly protein TraB | traB |
| RX585_RS24180 (RX585_24175) | 46905..47645 | - | 741 | WP_001230719 | type-F conjugative transfer system secretin TraK | traK |
| RX585_RS24185 (RX585_24180) | 47632..48198 | - | 567 | WP_000399769 | type IV conjugative transfer system protein TraE | traE |
| RX585_RS24190 (RX585_24185) | 48220..48531 | - | 312 | WP_000012129 | type IV conjugative transfer system protein TraL | traL |
| RX585_RS24195 (RX585_24190) | 48546..48908 | - | 363 | WP_001274201 | type IV conjugative transfer system pilin TraA | - |
| RX585_RS24200 (RX585_24195) | 48950..49177 | - | 228 | WP_001676655 | conjugal transfer relaxosome protein TraY | - |
| RX585_RS24205 (RX585_24200) | 49271..49957 | - | 687 | WP_000336297 | PAS domain-containing protein | - |
| RX585_RS24210 (RX585_24205) | 50150..50530 | - | 381 | WP_001151546 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| RX585_RS24215 (RX585_24210) | 50945..51415 | + | 471 | WP_001526856 | transglycosylase SLT domain-containing protein | virB1 |
| RX585_RS24220 (RX585_24215) | 51726..52544 | - | 819 | Protein_61 | DUF932 domain-containing protein | - |
| RX585_RS24225 (RX585_24220) | 52647..52805 | - | 159 | WP_001704449 | hypothetical protein | - |
| RX585_RS24230 (RX585_24225) | 52891..53019 | - | 129 | WP_000372429 | hypothetical protein | - |
| RX585_RS24235 (RX585_24230) | 53054..53791 | - | 738 | WP_000581933 | plasmid SOS inhibition protein A | - |
| RX585_RS24240 (RX585_24235) | 53788..54222 | - | 435 | WP_010999943 | conjugation system SOS inhibitor PsiB | - |
| RX585_RS24245 (RX585_24240) | 54262..56259 | - | 1998 | WP_000117513 | ParB/RepB/Spo0J family partition protein | - |