T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 4783..22079
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RXE34_RS25270 (RXE34_25270) | 104..895 | - | 792 | WP_022645137 | DUF5710 domain-containing protein | - |
| RXE34_RS25275 (RXE34_25275) | 943..1575 | + | 633 | WP_001419736 | hypothetical protein | - |
| RXE34_RS25280 (RXE34_25280) | 1675..1926 | + | 252 | WP_000121741 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| RXE34_RS25285 (RXE34_25285) | 1916..2197 | + | 282 | WP_000638823 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| RXE34_RS25290 (RXE34_25290) | 2265..2564 | + | 300 | WP_000835764 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| RXE34_RS25295 (RXE34_25295) | 2567..3802 | + | 1236 | WP_045146393 | TcpQ domain-containing protein | - |
| RXE34_RS25300 (RXE34_25300) | 3808..4245 | + | 438 | WP_000539665 | type IV pilus biogenesis protein PilM | - |
| RXE34_RS25305 (RXE34_25305) | 4364..4762 | + | 399 | WP_097728036 | hypothetical protein | - |
| RXE34_RS25310 (RXE34_25310) | 4783..5367 | + | 585 | WP_097728035 | lytic transglycosylase domain-containing protein | virB1 |
| RXE34_RS25315 (RXE34_25315) | 5367..5657 | + | 291 | WP_063268638 | conjugal transfer protein | - |
| RXE34_RS25320 (RXE34_25320) | 5728..6048 | + | 321 | WP_000362081 | VirB3 family type IV secretion system protein | virB3 |
| RXE34_RS25325 (RXE34_25325) | 6054..8411 | + | 2358 | WP_103809047 | VirB4 family type IV secretion system protein | virb4 |
| RXE34_RS25330 (RXE34_25330) | 8575..9309 | + | 735 | WP_103809048 | virB8 family protein | virB8 |
| RXE34_RS25335 (RXE34_25335) | 9375..10076 | + | 702 | WP_000274524 | TrbG/VirB9 family P-type conjugative transfer protein | virB9 |
| RXE34_RS25340 (RXE34_25340) | 10066..11205 | + | 1140 | WP_103809049 | TrbI/VirB10 family protein | virB10 |
| RXE34_RS25345 (RXE34_25345) | 11224..12279 | + | 1056 | WP_103809050 | P-type DNA transfer ATPase VirB11 | virB11 |
| RXE34_RS25350 (RXE34_25350) | 12295..14253 | + | 1959 | WP_316441401 | type IV secretory system conjugative DNA transfer family protein | - |
| RXE34_RS25355 (RXE34_25355) | 14300..14791 | + | 492 | WP_106509037 | ATP-binding protein | virb4 |
| RXE34_RS25360 (RXE34_25360) | 14784..16427 | + | 1644 | WP_106509036 | PilN family type IVB pilus formation outer membrane protein | - |
| RXE34_RS25365 (RXE34_25365) | 16478..17788 | + | 1311 | WP_001454111 | type 4b pilus protein PilO2 | - |
| RXE34_RS25370 (RXE34_25370) | 17772..18266 | + | 495 | WP_045146418 | type IV pilus biogenesis protein PilP | - |
| RXE34_RS25375 (RXE34_25375) | 18291..19829 | + | 1539 | WP_045146419 | GspE/PulE family protein | virB11 |
| RXE34_RS25380 (RXE34_25380) | 19820..20929 | + | 1110 | WP_000974900 | type II secretion system F family protein | - |
| RXE34_RS25385 (RXE34_25385) | 20974..21531 | + | 558 | WP_106509035 | type 4 pilus major pilin | - |
| RXE34_RS25390 (RXE34_25390) | 21597..22079 | + | 483 | WP_001258095 | lytic transglycosylase domain-containing protein | virB1 |
| RXE34_RS25395 (RXE34_25395) | 22083..22718 | + | 636 | WP_106509034 | A24 family peptidase | - |
| RXE34_RS25400 (RXE34_25400) | 22731..24017 | + | 1287 | WP_316441402 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| RXE34_RS25405 (RXE34_25405) | 25030..26154 | + | 1125 | WP_106509043 | site-specific integrase | - |
| RXE34_RS25410 (RXE34_25410) | 26166..26819 | + | 654 | WP_202615546 | hypothetical protein | - |