T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 1..19625
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| REW78_RS00060 (REW78_000060) | 1..2640 | + | 2640 | WP_013214024 | type IV secretion system protein TraC | virb4 |
| REW78_RS00065 (REW78_000065) | 2640..3029 | + | 390 | WP_004167468 | type-F conjugative transfer system protein TrbI | - |
| REW78_RS00070 (REW78_000070) | 3029..3664 | + | 636 | WP_029497419 | type-F conjugative transfer system protein TraW | traW |
| REW78_RS00075 (REW78_000075) | 3699..4100 | + | 402 | WP_040120376 | hypothetical protein | - |
| REW78_RS00080 (REW78_000080) | 4097..5086 | + | 990 | WP_029497420 | conjugal transfer pilus assembly protein TraU | traU |
| REW78_RS00085 (REW78_000085) | 5099..5737 | + | 639 | WP_015065635 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| REW78_RS00090 (REW78_000090) | 5796..7751 | + | 1956 | WP_040120375 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| REW78_RS00095 (REW78_000095) | 7783..8037 | + | 255 | WP_004152674 | conjugal transfer protein TrbE | - |
| REW78_RS00100 (REW78_000100) | 8015..8263 | + | 249 | WP_004152675 | hypothetical protein | - |
| REW78_RS00105 (REW78_000105) | 8276..8602 | + | 327 | WP_004144402 | hypothetical protein | - |
| REW78_RS00110 (REW78_000110) | 8623..9375 | + | 753 | WP_004152677 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| REW78_RS00115 (REW78_000115) | 9386..9625 | + | 240 | WP_004144400 | type-F conjugative transfer system pilin chaperone TraQ | - |
| REW78_RS00120 (REW78_000120) | 9597..10154 | + | 558 | WP_013214031 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| REW78_RS00125 (REW78_000125) | 10200..10643 | + | 444 | WP_014343488 | F-type conjugal transfer protein TrbF | - |
| REW78_RS00130 (REW78_000130) | 10621..12000 | + | 1380 | WP_072198320 | conjugal transfer pilus assembly protein TraH | traH |
| REW78_RS00135 (REW78_000135) | 12000..14849 | + | 2850 | WP_040120373 | conjugal transfer mating-pair stabilization protein TraG | traG |
| REW78_RS00140 (REW78_000140) | 14855..15382 | + | 528 | WP_040120388 | conjugal transfer protein TraS | - |
| REW78_RS00145 (REW78_000145) | 15571..16302 | + | 732 | WP_004152629 | conjugal transfer complement resistance protein TraT | - |
| REW78_RS00150 (REW78_000150) | 16495..17184 | + | 690 | WP_072198322 | hypothetical protein | - |
| REW78_RS00155 (REW78_000155) | 17313..19625 | + | 2313 | WP_040120372 | type IV conjugative transfer system coupling protein TraD | virb4 |