T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 21819..41667
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RRL13_RS24900 (RRL13_24900) | 17664..19097 | - | 1434 | WP_001288432 | DNA cytosine methyltransferase | - |
| RRL13_RS24905 (RRL13_24905) | 19196..19468 | + | 273 | Protein_21 | IS1 family transposase | - |
| RRL13_RS24910 (RRL13_24910) | 19479..19685 | - | 207 | WP_001749967 | hypothetical protein | - |
| RRL13_RS24915 (RRL13_24915) | 19690..20337 | - | 648 | WP_015344958 | restriction endonuclease | - |
| RRL13_RS24920 (RRL13_24920) | 20387..20698 | - | 312 | WP_001452736 | hypothetical protein | - |
| RRL13_RS24925 (RRL13_24925) | 20734..21048 | - | 315 | WP_001749965 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| RRL13_RS24930 (RRL13_24930) | 21045..21389 | - | 345 | WP_001749964 | hypothetical protein | - |
| RRL13_RS24935 (RRL13_24935) | 21405..21776 | - | 372 | WP_011867773 | H-NS family nucleoid-associated regulatory protein | - |
| RRL13_RS24940 (RRL13_24940) | 21819..22553 | + | 735 | WP_001749963 | lytic transglycosylase domain-containing protein | virB1 |
| RRL13_RS24945 (RRL13_24945) | 22562..22843 | + | 282 | WP_000440698 | transcriptional repressor KorA | - |
| RRL13_RS24950 (RRL13_24950) | 22853..23146 | + | 294 | WP_001749962 | hypothetical protein | virB2 |
| RRL13_RS24955 (RRL13_24955) | 23196..23513 | + | 318 | WP_000496058 | VirB3 family type IV secretion system protein | virB3 |
| RRL13_RS24960 (RRL13_24960) | 23645..26113 | + | 2469 | WP_224743086 | VirB4 family type IV secretion/conjugal transfer ATPase | virb4 |
| RRL13_RS24965 (RRL13_24965) | 26131..26844 | + | 714 | WP_001749960 | type IV secretion system protein | virB5 |
| RRL13_RS24970 (RRL13_24970) | 26852..27079 | + | 228 | WP_001749959 | IncN-type entry exclusion lipoprotein EexN | - |
| RRL13_RS24975 (RRL13_24975) | 27095..28135 | + | 1041 | WP_001749958 | type IV secretion system protein | virB6 |
| RRL13_RS24980 (RRL13_24980) | 28218..28364 | + | 147 | WP_001257173 | conjugal transfer protein TraN | - |
| RRL13_RS24985 (RRL13_24985) | 28354..29052 | + | 699 | WP_000646594 | virB8 family protein | virB8 |
| RRL13_RS24990 (RRL13_24990) | 29063..29947 | + | 885 | WP_000735066 | TrbG/VirB9 family P-type conjugative transfer protein | virB9 |
| RRL13_RS24995 (RRL13_24995) | 29947..31107 | + | 1161 | WP_000101710 | type IV secretion system protein VirB10 | virB10 |
| RRL13_RS25000 (RRL13_25000) | 31149..32144 | + | 996 | WP_000128596 | ATPase, T2SS/T4P/T4SS family | virB11 |
| RRL13_RS25005 (RRL13_25005) | 32144..32677 | + | 534 | WP_000792636 | phospholipase D family protein | - |
| RRL13_RS25010 (RRL13_25010) | 32851..33303 | - | 453 | WP_001749956 | DUF6710 family protein | - |
| RRL13_RS25015 (RRL13_25015) | 33614..33856 | + | 243 | WP_000844627 | transposase | - |
| RRL13_RS25020 (RRL13_25020) | 33888..34538 | - | 651 | WP_315688745 | tetracycline resistance transcriptional repressor TetR(A) | - |
| RRL13_RS25025 (RRL13_25025) | 34644..35843 | + | 1200 | WP_012579085 | tetracycline efflux MFS transporter Tet(A) | - |
| RRL13_RS25030 (RRL13_25030) | 35875..36528 | - | 654 | Protein_46 | EamA family transporter | - |
| RRL13_RS25035 (RRL13_25035) | 36723..36896 | - | 174 | WP_001749978 | hypothetical protein | - |
| RRL13_RS25040 (RRL13_25040) | 36896..40138 | - | 3243 | WP_001749977 | MobF family relaxase | - |
| RRL13_RS25045 (RRL13_25045) | 40138..41667 | - | 1530 | WP_001749976 | type IV secretion system DNA-binding domain-containing protein | virb4 |
| RRL13_RS25050 (RRL13_25050) | 41669..41959 | - | 291 | WP_000706094 | hypothetical protein | - |
| RRL13_RS25055 (RRL13_25055) | 42576..42995 | + | 420 | WP_001749974 | plasmid stabilization protein StbA | - |
| RRL13_RS25060 (RRL13_25060) | 43004..43720 | + | 717 | WP_001749973 | StbB family protein | - |
| RRL13_RS25065 (RRL13_25065) | 43722..44090 | + | 369 | WP_001749972 | plasmid stabilization protein StbC | - |
| RRL13_RS25070 (RRL13_25070) | 44272..44616 | + | 345 | WP_000999874 | hypothetical protein | - |
| RRL13_RS25075 (RRL13_25075) | 44727..45047 | - | 321 | WP_001749971 | protein CcgAII | - |
| RRL13_RS25080 (RRL13_25080) | 45102..45281 | - | 180 | WP_000214483 | protein CcgAI | - |
| RRL13_RS25085 (RRL13_25085) | 46008..46517 | - | 510 | WP_000129958 | antirestriction protein ArdA | - |