T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 83864..106937
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RN333_RS22380 (RN333_22380) | 83864..86359 | - | 2496 | WP_314120982 | type IV conjugative transfer system coupling protein TraD | virb4 |
| RN333_RS22385 (RN333_22385) | 86507..86878 | - | 372 | WP_314120984 | hypothetical protein | - |
| RN333_RS22390 (RN333_22390) | 87094..87825 | - | 732 | WP_088222284 | complement resistance protein TraT | - |
| RN333_RS22395 (RN333_22395) | 87970..88542 | - | 573 | WP_314120986 | hypothetical protein | - |
| RN333_RS22400 (RN333_22400) | 88555..91770 | - | 3216 | WP_314120988 | conjugal transfer mating-pair stabilization protein TraG | traG |
| RN333_RS22405 (RN333_22405) | 91810..93174 | - | 1365 | WP_314120990 | conjugal transfer pilus assembly protein TraH | traH |
| RN333_RS22410 (RN333_22410) | 93167..93436 | - | 270 | WP_254915067 | hypothetical protein | - |
| RN333_RS22415 (RN333_22415) | 93451..94050 | - | 600 | WP_314120992 | F-type conjugal transfer protein TrbB | traF |
| RN333_RS22420 (RN333_22420) | 94040..94264 | - | 225 | WP_140419641 | hypothetical protein | - |
| RN333_RS22425 (RN333_22425) | 94352..95134 | - | 783 | WP_314121261 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| RN333_RS22430 (RN333_22430) | 95134..96954 | - | 1821 | WP_314120995 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| RN333_RS22435 (RN333_22435) | 96951..97568 | - | 618 | WP_314120997 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| RN333_RS22440 (RN333_22440) | 97576..98580 | - | 1005 | WP_088222293 | conjugal transfer pilus assembly protein TraU | traU |
| RN333_RS22445 (RN333_22445) | 98565..98906 | - | 342 | WP_129364012 | hypothetical protein | - |
| RN333_RS22450 (RN333_22450) | 98974..99183 | - | 210 | WP_129364011 | hypothetical protein | - |
| RN333_RS22455 (RN333_22455) | 99335..99616 | - | 282 | WP_314121001 | hypothetical protein | - |
| RN333_RS22460 (RN333_22460) | 99676..100311 | - | 636 | WP_314121003 | type-F conjugative transfer system protein TraW | traW |
| RN333_RS22465 (RN333_22465) | 100308..100718 | - | 411 | WP_314121006 | type-F conjugative transfer system protein TrbI | - |
| RN333_RS22470 (RN333_22470) | 100715..103324 | - | 2610 | WP_088222298 | type IV secretion system protein TraC | virb4 |
| RN333_RS22475 (RN333_22475) | 103324..103869 | - | 546 | WP_314121009 | type IV conjugative transfer system lipoprotein TraV | traV |
| RN333_RS22480 (RN333_22480) | 103909..105300 | - | 1392 | WP_314121011 | F-type conjugal transfer pilus assembly protein TraB | traB |
| RN333_RS22485 (RN333_22485) | 105297..106037 | - | 741 | WP_088222301 | type-F conjugative transfer system secretin TraK | traK |
| RN333_RS22490 (RN333_22490) | 106050..106631 | - | 582 | WP_088222302 | TraE/TraK family type IV conjugative transfer system protein | traE |
| RN333_RS22495 (RN333_22495) | 106635..106937 | - | 303 | WP_314121015 | type IV conjugative transfer system protein TraL | traL |
| RN333_RS22500 (RN333_22500) | 106940..107287 | - | 348 | WP_129364003 | type IV conjugative transfer system pilin TraA | - |
| RN333_RS22505 (RN333_22505) | 107483..108115 | + | 633 | WP_314121017 | Arc family DNA-binding protein | - |
| RN333_RS22510 (RN333_22510) | 108155..108547 | - | 393 | WP_088222306 | relaxosome protein TraM | - |
| RN333_RS22515 (RN333_22515) | 109174..109698 | + | 525 | WP_314121262 | lytic transglycosylase domain-containing protein | - |
| RN333_RS22520 (RN333_22520) | 109734..110555 | - | 822 | WP_314121020 | DUF932 domain-containing protein | - |
| RN333_RS22525 (RN333_22525) | 110615..111031 | - | 417 | WP_314121022 | hypothetical protein | - |
| RN333_RS22530 (RN333_22530) | 111588..111815 | - | 228 | WP_314121024 | hypothetical protein | - |