T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 180747..197170
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N6X25_RS00965 | 176873..177445 | - | 573 | WP_001493762 | recombinase family protein | - |
| N6X25_RS00970 | 177582..178127 | - | 546 | WP_001493763 | plasmid pRiA4b ORF-3 family protein | - |
| N6X25_RS00975 | 178236..178397 | + | 162 | WP_260630687 | IS1 family transposase | - |
| N6X25_RS00980 | 178417..178614 | - | 198 | WP_000844102 | hypothetical protein | - |
| N6X25_RS00985 | 178619..179260 | - | 642 | WP_001694850 | restriction endonuclease | - |
| N6X25_RS00990 | 179316..179549 | - | 234 | WP_001191790 | hypothetical protein | - |
| N6X25_RS00995 | 179663..179977 | - | 315 | WP_000734776 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| N6X25_RS01000 | 179940..180317 | - | 378 | WP_000504251 | hypothetical protein | - |
| N6X25_RS01005 | 180333..180704 | - | 372 | WP_011867773 | H-NS family nucleoid-associated regulatory protein | - |
| N6X25_RS01010 | 180747..181481 | + | 735 | WP_000033783 | lytic transglycosylase domain-containing protein | virB1 |
| N6X25_RS01015 | 181490..181771 | + | 282 | WP_000440698 | transcriptional repressor KorA | - |
| N6X25_RS01020 | 181781..182074 | + | 294 | WP_000209137 | TrbC/VirB2 family protein | virB2 |
| N6X25_RS01025 | 182124..182441 | + | 318 | WP_000496058 | VirB3 family type IV secretion system protein | virB3 |
| N6X25_RS01030 | 182441..185041 | + | 2601 | WP_001200711 | VirB4 family type IV secretion/conjugal transfer ATPase | virb4 |
| N6X25_RS01035 | 185059..185772 | + | 714 | WP_000749362 | type IV secretion system protein | virB5 |
| N6X25_RS01040 | 185780..186007 | + | 228 | WP_000734973 | IncN-type entry exclusion lipoprotein EexN | - |
| N6X25_RS01045 | 186023..187063 | + | 1041 | WP_000886022 | type IV secretion system protein | virB6 |
| N6X25_RS01050 | 187282..187980 | + | 699 | WP_000646594 | virB8 family protein | virB8 |
| N6X25_RS01055 | 187991..188875 | + | 885 | WP_000735067 | TrbG/VirB9 family P-type conjugative transfer protein | virB9 |
| N6X25_RS01060 | 188875..190035 | + | 1161 | WP_000101711 | type IV secretion system protein VirB10 | virB10 |
| N6X25_RS01065 | 190077..191072 | + | 996 | WP_000128596 | ATPase, T2SS/T4P/T4SS family | virB11 |
| N6X25_RS01070 | 191072..191605 | + | 534 | WP_000731968 | phospholipase D family protein | - |
| N6X25_RS01185 | 191779..192405 | - | 627 | WP_000434930 | DUF6710 family protein | - |
| N6X25_RS01080 | 192405..195641 | - | 3237 | WP_000884352 | MobF family relaxase | - |
| N6X25_RS01085 | 195641..197170 | - | 1530 | WP_000342688 | type IV secretion system DNA-binding domain-containing protein | virb4 |
| N6X25_RS01090 | 197172..197588 | - | 417 | WP_001532083 | hypothetical protein | - |
| N6X25_RS01095 | 198100..198519 | + | 420 | WP_000802909 | plasmid stabilization protein StbA | - |
| N6X25_RS01100 | 198528..199244 | + | 717 | WP_000861577 | StbB family protein | - |
| N6X25_RS01105 | 199246..199614 | + | 369 | WP_000414913 | plasmid stabilization protein StbC | - |
| N6X25_RS01110 | 199796..200140 | + | 345 | WP_000999874 | hypothetical protein | - |
| N6X25_RS01115 | 200251..200571 | - | 321 | WP_000211833 | protein CcgAII | - |
| N6X25_RS01120 | 200626..200805 | - | 180 | WP_000214483 | protein CcgAI | - |
| N6X25_RS01125 | 201637..202146 | - | 510 | WP_000129958 | antirestriction protein ArdA | - |