T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 1977..18485
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RIK60_RS25215 (RIK60_25215) | 1384..1980 | - | 597 | WP_015060003 | hypothetical protein | - |
| RIK60_RS25220 (RIK60_25220) | 1977..3185 | - | 1209 | WP_011091082 | conjugal transfer protein TraW | traW |
| RIK60_RS25225 (RIK60_25225) | 3182..6232 | - | 3051 | WP_004187482 | hypothetical protein | traU |
| RIK60_RS25230 (RIK60_25230) | 6229..6723 | - | 495 | WP_004187480 | hypothetical protein | - |
| RIK60_RS25235 (RIK60_25235) | 6769..7158 | - | 390 | WP_004187479 | DUF6750 family protein | traR |
| RIK60_RS25240 (RIK60_25240) | 7175..7705 | - | 531 | WP_004187478 | conjugal transfer protein TraQ | traQ |
| RIK60_RS25245 (RIK60_25245) | 7729..8433 | - | 705 | WP_015060002 | conjugal transfer protein TraP | traP |
| RIK60_RS25250 (RIK60_25250) | 8445..9794 | - | 1350 | WP_004187474 | conjugal transfer protein TraO | traO |
| RIK60_RS25255 (RIK60_25255) | 9806..10957 | - | 1152 | WP_004187471 | DotH/IcmK family type IV secretion protein | traN |
| RIK60_RS25260 (RIK60_25260) | 10966..11679 | - | 714 | WP_004187467 | DotI/IcmL family type IV secretion protein | traM |
| RIK60_RS25265 (RIK60_25265) | 11747..12157 | + | 411 | WP_004187465 | H-NS family nucleoid-associated regulatory protein | - |
| RIK60_RS25270 (RIK60_25270) | 12186..12341 | + | 156 | WP_172693602 | Hha/YmoA family nucleoid-associated regulatory protein | - |
| RIK60_RS25275 (RIK60_25275) | 12342..12854 | - | 513 | WP_011091071 | hypothetical protein | traL |
| RIK60_RS25280 (RIK60_25280) | 12820..16257 | - | 3438 | WP_015586048 | LPD7 domain-containing protein | - |
| RIK60_RS25285 (RIK60_25285) | 16282..16542 | - | 261 | WP_004187310 | IcmT/TraK family protein | traK |
| RIK60_RS25290 (RIK60_25290) | 16532..17695 | - | 1164 | WP_004187313 | plasmid transfer ATPase TraJ | virB11 |
| RIK60_RS25295 (RIK60_25295) | 17706..18485 | - | 780 | WP_004187315 | type IV secretory system conjugative DNA transfer family protein | traI |
| RIK60_RS25300 (RIK60_25300) | 18482..18982 | - | 501 | WP_004187320 | DotD/TraH family lipoprotein | - |
| RIK60_RS25305 (RIK60_25305) | 18996..20975 | - | 1980 | WP_004187323 | TraI/MobA(P) family conjugative relaxase | - |
| RIK60_RS25310 (RIK60_25310) | 20962..21489 | - | 528 | WP_172740549 | plasmid mobilization protein MobA | - |
| RIK60_RS25315 (RIK60_25315) | 21524..21919 | + | 396 | WP_019725163 | hypothetical protein | - |
| RIK60_RS25320 (RIK60_25320) | 22421..22957 | - | 537 | WP_004187332 | hypothetical protein | - |
| RIK60_RS25325 (RIK60_25325) | 23090..23401 | - | 312 | WP_004187333 | hypothetical protein | - |