T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 61920..84960
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RIK62_RS23620 (RIK62_23620) | 58507..58737 | - | 231 | WP_311382346 | hypothetical protein | - |
| RIK62_RS23625 (RIK62_23625) | 58846..59130 | - | 285 | WP_311382347 | hypothetical protein | - |
| RIK62_RS23630 (RIK62_23630) | 59274..59543 | - | 270 | WP_048210058 | hypothetical protein | - |
| RIK62_RS23635 (RIK62_23635) | 59616..61916 | - | 2301 | WP_311382348 | F-type conjugative transfer protein TrbC | - |
| RIK62_RS23640 (RIK62_23640) | 61920..63116 | - | 1197 | WP_311382349 | thioredoxin fold domain-containing protein | trbB |
| RIK62_RS23645 (RIK62_23645) | 63169..64377 | - | 1209 | WP_311382350 | conjugal transfer protein TrbA | trbA |
| RIK62_RS23650 (RIK62_23650) | 64690..65322 | - | 633 | WP_311382351 | plasmid IncI1-type surface exclusion protein ExcA | - |
| RIK62_RS23655 (RIK62_23655) | 65383..67545 | - | 2163 | WP_311382352 | DotA/TraY family protein | traY |
| RIK62_RS23660 (RIK62_23660) | 67603..68145 | - | 543 | WP_053070179 | conjugal transfer protein TraX | - |
| RIK62_RS23665 (RIK62_23665) | 68142..69344 | - | 1203 | WP_048210062 | conjugal transfer protein TraW | traW |
| RIK62_RS23670 (RIK62_23670) | 69357..69926 | - | 570 | WP_284951006 | conjugal transfer protein TraV | traV |
| RIK62_RS23675 (RIK62_23675) | 69926..72979 | - | 3054 | WP_311382353 | ATP-binding protein | traU |
| RIK62_RS23680 (RIK62_23680) | 73060..73929 | - | 870 | WP_311382354 | conjugal transfer protein TraT | traT |
| RIK62_RS23685 (RIK62_23685) | 73976..74380 | - | 405 | WP_172689581 | DUF6750 family protein | traR |
| RIK62_RS23690 (RIK62_23690) | 74415..74939 | - | 525 | WP_172689580 | conjugal transfer protein TraQ | traQ |
| RIK62_RS23695 (RIK62_23695) | 74939..75709 | - | 771 | WP_311382355 | conjugal transfer protein TraP | traP |
| RIK62_RS23700 (RIK62_23700) | 75693..77009 | - | 1317 | WP_311382356 | conjugal transfer protein TraO | traO |
| RIK62_RS23705 (RIK62_23705) | 77009..77992 | - | 984 | WP_284951011 | DotH/IcmK family type IV secretion protein | traN |
| RIK62_RS23710 (RIK62_23710) | 78003..78704 | - | 702 | WP_284951012 | DotI/IcmL/TraM family protein | traM |
| RIK62_RS23715 (RIK62_23715) | 78710..79060 | - | 351 | WP_048210070 | hypothetical protein | traL |
| RIK62_RS23720 (RIK62_23720) | 79078..82626 | - | 3549 | WP_311382357 | LPD7 domain-containing protein | - |
| RIK62_RS23725 (RIK62_23725) | 82698..82985 | - | 288 | WP_048210072 | IcmT/TraK family protein | traK |
| RIK62_RS23730 (RIK62_23730) | 82982..84142 | - | 1161 | WP_311382358 | plasmid transfer ATPase TraJ | virB11 |
| RIK62_RS23735 (RIK62_23735) | 84154..84960 | - | 807 | WP_172689573 | type IV secretory system conjugative DNA transfer family protein | traI |
| RIK62_RS23740 (RIK62_23740) | 84957..85430 | - | 474 | WP_311382359 | DotD/TraH family lipoprotein | - |
| RIK62_RS23745 (RIK62_23745) | 85518..86036 | - | 519 | WP_172689571 | hypothetical protein | - |