T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 512..24155
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RIK67_RS00655 (RIK67_00655) | 512..1381 | - | 870 | WP_311382354 | conjugal transfer protein TraT | traT |
| RIK67_RS00660 (RIK67_00660) | 1428..1832 | - | 405 | WP_172689581 | DUF6750 family protein | traR |
| RIK67_RS00665 (RIK67_00665) | 1867..2391 | - | 525 | WP_172689580 | conjugal transfer protein TraQ | traQ |
| RIK67_RS00670 (RIK67_00670) | 2391..3161 | - | 771 | WP_311382355 | conjugal transfer protein TraP | traP |
| RIK67_RS00675 (RIK67_00675) | 3145..4461 | - | 1317 | WP_311382356 | conjugal transfer protein TraO | traO |
| RIK67_RS00680 (RIK67_00680) | 4461..5444 | - | 984 | WP_284951011 | DotH/IcmK family type IV secretion protein | traN |
| RIK67_RS00685 (RIK67_00685) | 5455..6156 | - | 702 | WP_284951012 | DotI/IcmL/TraM family protein | traM |
| RIK67_RS00690 (RIK67_00690) | 6162..6512 | - | 351 | WP_048210070 | hypothetical protein | traL |
| RIK67_RS00695 (RIK67_00695) | 6530..10078 | - | 3549 | WP_311382357 | LPD7 domain-containing protein | - |
| RIK67_RS00700 (RIK67_00700) | 10150..10437 | - | 288 | WP_048210072 | IcmT/TraK family protein | traK |
| RIK67_RS00705 (RIK67_00705) | 10434..11594 | - | 1161 | WP_311382358 | plasmid transfer ATPase TraJ | virB11 |
| RIK67_RS00710 (RIK67_00710) | 11606..12412 | - | 807 | WP_172689573 | type IV secretory system conjugative DNA transfer family protein | traI |
| RIK67_RS00715 (RIK67_00715) | 12409..12882 | - | 474 | WP_311382359 | DotD/TraH family lipoprotein | - |
| RIK67_RS00720 (RIK67_00720) | 12970..13488 | - | 519 | WP_172689571 | hypothetical protein | - |
| RIK67_RS00725 (RIK67_00725) | 13509..14717 | - | 1209 | WP_172689570 | conjugal transfer protein TraF | - |
| RIK67_RS00730 (RIK67_00730) | 14820..15656 | - | 837 | WP_172689569 | hypothetical protein | traE |
| RIK67_RS00735 (RIK67_00735) | 15802..16278 | - | 477 | WP_156174862 | hypothetical protein | - |
| RIK67_RS00740 (RIK67_00740) | 16298..17458 | - | 1161 | WP_048210079 | site-specific integrase | - |
| RIK67_RS00745 (RIK67_00745) | 18321..19658 | - | 1338 | WP_311382360 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| RIK67_RS00750 (RIK67_00750) | 19655..20329 | - | 675 | WP_284950938 | prepilin peptidase | - |
| RIK67_RS00755 (RIK67_00755) | 20314..20796 | - | 483 | WP_284951020 | lytic transglycosylase domain-containing protein | virB1 |
| RIK67_RS00760 (RIK67_00760) | 20881..21495 | - | 615 | WP_311382361 | type 4 pilus major pilin | - |
| RIK67_RS00765 (RIK67_00765) | 21509..22603 | - | 1095 | WP_311382374 | type II secretion system F family protein | - |
| RIK67_RS00770 (RIK67_00770) | 22596..24155 | - | 1560 | WP_311382362 | ATPase, T2SS/T4P/T4SS family | virB11 |
| RIK67_RS00775 (RIK67_00775) | 24158..24673 | - | 516 | WP_311382363 | type IV pilus biogenesis protein PilP | - |
| RIK67_RS00780 (RIK67_00780) | 24657..25961 | - | 1305 | WP_311382364 | type 4b pilus protein PilO2 | - |
| RIK67_RS00785 (RIK67_00785) | 25963..27639 | - | 1677 | WP_048210024 | PilN family type IVB pilus formation outer membrane protein | - |
| RIK67_RS00790 (RIK67_00790) | 27654..28094 | - | 441 | WP_284950950 | type IV pilus biogenesis protein PilM | - |
| RIK67_RS00795 (RIK67_00795) | 28091..28897 | - | 807 | WP_311382365 | TcpQ domain-containing protein | - |