T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 1203..37903
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NIU13_RS25485 (NIU13_25350) | 740..1192 | + | 453 | WP_001247337 | type IV pilus biogenesis protein PilP | - |
| NIU13_RS25490 (NIU13_25355) | 1203..2756 | + | 1554 | WP_000362206 | GspE/PulE family protein | virB11 |
| NIU13_RS25495 (NIU13_25360) | 2769..3854 | + | 1086 | WP_001208802 | type II secretion system F family protein | - |
| NIU13_RS25500 (NIU13_25365) | 3871..4485 | + | 615 | WP_000908227 | type 4 pilus major pilin | - |
| NIU13_RS25505 (NIU13_25370) | 4495..5055 | + | 561 | WP_000014005 | lytic transglycosylase domain-containing protein | virB1 |
| NIU13_RS25510 (NIU13_25375) | 5040..5696 | + | 657 | WP_001193549 | A24 family peptidase | - |
| NIU13_RS25515 (NIU13_25380) | 5696..6985 | + | 1290 | Protein_7 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| NIU13_RS25520 (NIU13_25385) | 7384..8538 | + | 1155 | WP_001139956 | tyrosine-type recombinase/integrase | - |
| NIU13_RS25525 (NIU13_25390) | 8689..9513 | + | 825 | WP_001238932 | conjugal transfer protein TraE | traE |
| NIU13_RS25530 (NIU13_25395) | 9599..10801 | + | 1203 | WP_000976357 | conjugal transfer protein TraF | - |
| NIU13_RS25535 (NIU13_25400) | 10860..11444 | + | 585 | WP_000977522 | histidine phosphatase family protein | - |
| NIU13_RS25540 (NIU13_25405) | 11839..12297 | + | 459 | WP_001079808 | IncI1-type conjugal transfer lipoprotein TraH | - |
| NIU13_RS25545 (NIU13_25410) | 12294..13112 | + | 819 | WP_000646098 | IncI1-type conjugal transfer lipoprotein TraI | traI |
| NIU13_RS25550 (NIU13_25415) | 13109..14257 | + | 1149 | WP_001024972 | plasmid transfer ATPase TraJ | virB11 |
| NIU13_RS25555 (NIU13_25420) | 14254..14544 | + | 291 | WP_001314267 | hypothetical protein | traK |
| NIU13_RS25560 (NIU13_25425) | 14559..15110 | + | 552 | WP_000014586 | phospholipase D family protein | - |
| NIU13_RS25565 (NIU13_25430) | 15200..18964 | + | 3765 | WP_001141540 | LPD7 domain-containing protein | - |
| NIU13_RS25570 (NIU13_25435) | 18982..19329 | + | 348 | WP_001055900 | conjugal transfer protein | traL |
| NIU13_RS25575 (NIU13_25440) | 19326..20018 | + | 693 | WP_000138552 | DotI/IcmL family type IV secretion protein | traM |
| NIU13_RS25580 (NIU13_25445) | 20029..21012 | + | 984 | WP_001191879 | IncI1-type conjugal transfer protein TraN | traN |
| NIU13_RS25585 (NIU13_25450) | 21015..22304 | + | 1290 | WP_001271994 | conjugal transfer protein TraO | traO |
| NIU13_RS25590 (NIU13_25455) | 22304..23008 | + | 705 | WP_000801920 | IncI1-type conjugal transfer protein TraP | traP |
| NIU13_RS25595 (NIU13_25460) | 23008..23535 | + | 528 | WP_001055569 | conjugal transfer protein TraQ | traQ |
| NIU13_RS25600 (NIU13_25465) | 23586..23990 | + | 405 | WP_000086965 | IncI1-type conjugal transfer protein TraR | traR |
| NIU13_RS25605 (NIU13_25470) | 24054..24242 | + | 189 | WP_001277253 | putative conjugal transfer protein TraS | - |
| NIU13_RS25610 (NIU13_25475) | 24226..25026 | + | 801 | WP_001164784 | IncI1-type conjugal transfer protein TraT | traT |
| NIU13_RS25615 (NIU13_25480) | 25116..28160 | + | 3045 | WP_001024789 | IncI1-type conjugal transfer protein TraU | traU |
| NIU13_RS25620 (NIU13_25485) | 28160..28774 | + | 615 | WP_000337399 | IncI1-type conjugal transfer protein TraV | traV |
| NIU13_RS25625 (NIU13_25490) | 28741..29943 | + | 1203 | WP_001189160 | IncI1-type conjugal transfer protein TraW | traW |
| NIU13_RS25630 (NIU13_25495) | 29972..30556 | + | 585 | WP_001037983 | IncI1-type conjugal transfer protein TraX | - |
| NIU13_RS25635 (NIU13_25500) | 30653..32821 | + | 2169 | WP_000698360 | IncI1-type conjugal transfer membrane protein TraY | traY |
| NIU13_RS25640 (NIU13_25505) | 32897..33511 | + | 615 | WP_000578648 | plasmid IncI1-type surface exclusion protein ExcA | - |
| NIU13_RS25645 (NIU13_25510) | 33609..33818 | + | 210 | WP_001140543 | hemolysin expression modulator Hha | - |
| NIU13_RS25650 (NIU13_25515) | 33936..34178 | + | 243 | WP_000504400 | hypothetical protein | - |
| NIU13_RS25655 | 34243..34338 | - | 96 | WP_000609148 | DinQ-like type I toxin DqlB | - |
| NIU13_RS25660 (NIU13_25525) | 34839..35090 | + | 252 | WP_001291964 | hypothetical protein | - |
| NIU13_RS25665 (NIU13_25530) | 35162..35314 | - | 153 | WP_001331364 | Hok/Gef family protein | - |
| NIU13_RS25670 (NIU13_25535) | 35606..36814 | + | 1209 | WP_000121273 | IncI1-type conjugal transfer protein TrbA | trbA |
| NIU13_RS25675 (NIU13_25540) | 36833..37903 | + | 1071 | WP_000151589 | IncI1-type conjugal transfer protein TrbB | trbB |
| NIU13_RS25680 (NIU13_25545) | 37896..40187 | + | 2292 | WP_001289262 | F-type conjugative transfer protein TrbC | - |