T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 42439..75520
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DAY16_RS23795 (DAY16_023790) | 37566..38534 | + | 969 | WP_051142412 | TcpQ domain-containing protein | - |
| DAY16_RS23800 (DAY16_023795) | 38534..38965 | + | 432 | WP_001644787 | type IV pilus biogenesis protein PilM | - |
| DAY16_RS23805 (DAY16_023800) | 38980..40602 | + | 1623 | WP_077957289 | PilN family type IVB pilus formation outer membrane protein | - |
| DAY16_RS23810 (DAY16_023805) | 40607..41890 | + | 1284 | WP_024153801 | type 4b pilus protein PilO2 | - |
| DAY16_RS23815 (DAY16_023810) | 41877..42407 | + | 531 | WP_024153800 | type IV pilus biogenesis protein PilP | - |
| DAY16_RS23820 (DAY16_023815) | 42439..43938 | + | 1500 | WP_001644792 | GspE/PulE family protein | virB11 |
| DAY16_RS23825 (DAY16_023820) | 43931..45046 | + | 1116 | WP_051142411 | type II secretion system F family protein | - |
| DAY16_RS23830 (DAY16_023825) | 45072..45665 | + | 594 | WP_024153799 | type 4 pilus major pilin | - |
| DAY16_RS23835 (DAY16_023830) | 45679..46149 | + | 471 | WP_023208005 | lytic transglycosylase domain-containing protein | virB1 |
| DAY16_RS23840 (DAY16_023835) | 46149..46760 | + | 612 | WP_024153798 | prepilin peptidase | - |
| DAY16_RS23845 (DAY16_023840) | 46859..48163 | + | 1305 | WP_042836862 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| DAY16_RS23850 (DAY16_023845) | 48247..48630 | - | 384 | Protein_45 | phage tail protein | - |
| DAY16_RS23855 (DAY16_023850) | 48718..49872 | + | 1155 | WP_000089546 | site-specific integrase | - |
| DAY16_RS23860 (DAY16_023855) | 49997..50452 | + | 456 | WP_000775487 | DotD/TraH family lipoprotein | - |
| DAY16_RS23865 (DAY16_023860) | 50449..51270 | + | 822 | WP_000213330 | type IV secretory system conjugative DNA transfer family protein | traI |
| DAY16_RS23870 (DAY16_023865) | 51267..52436 | + | 1170 | WP_024153796 | plasmid transfer ATPase TraJ | virB11 |
| DAY16_RS23875 (DAY16_023870) | 52426..52692 | + | 267 | WP_024153795 | IcmT/TraK family protein | traK |
| DAY16_RS23880 (DAY16_023875) | 52704..56153 | + | 3450 | WP_070794374 | DUF5710 domain-containing protein | - |
| DAY16_RS23885 (DAY16_023880) | 56169..56639 | + | 471 | WP_000735118 | hypothetical protein | traL |
| DAY16_RS23890 (DAY16_023885) | 56702..57379 | + | 678 | WP_024153792 | DotI/IcmL/TraM family protein | traM |
| DAY16_RS23895 (DAY16_023890) | 57376..58404 | + | 1029 | WP_024153791 | DotH/IcmK family type IV secretion protein | traN |
| DAY16_RS23900 (DAY16_023895) | 58404..59606 | + | 1203 | WP_024153790 | conjugal transfer protein TraO | traO |
| DAY16_RS23905 (DAY16_023900) | 59603..60358 | + | 756 | WP_024153789 | hypothetical protein | traP |
| DAY16_RS23910 (DAY16_023905) | 60368..60898 | + | 531 | WP_000348307 | conjugal transfer protein TraQ | traQ |
| DAY16_RS23915 (DAY16_023910) | 60914..61312 | + | 399 | WP_000404336 | DUF6750 family protein | traR |
| DAY16_RS23920 (DAY16_023915) | 61370..61822 | + | 453 | WP_024153787 | hypothetical protein | - |
| DAY16_RS23925 (DAY16_023920) | 61927..62229 | + | 303 | WP_024153786 | hypothetical protein | - |
| DAY16_RS23930 (DAY16_023925) | 62285..62893 | + | 609 | WP_024153785 | hypothetical protein | traT |
| DAY16_RS23935 (DAY16_023930) | 62890..65952 | + | 3063 | WP_024153784 | conjugal transfer protein | traU |
| DAY16_RS23940 (DAY16_023935) | 65971..67191 | + | 1221 | WP_024153783 | conjugal transfer protein TraW | traW |
| DAY16_RS23945 (DAY16_023940) | 67188..67706 | + | 519 | WP_024153782 | conjugal transfer protein TraX | - |
| DAY16_RS23950 (DAY16_023945) | 67758..69890 | + | 2133 | WP_024153781 | DotA/TraY family protein | traY |
| DAY16_RS23955 (DAY16_023950) | 69901..70446 | + | 546 | WP_024153780 | hypothetical protein | - |
| DAY16_RS23960 (DAY16_023955) | 70548..71063 | - | 516 | WP_023228531 | GNAT family N-acetyltransferase | - |
| DAY16_RS23965 (DAY16_023960) | 71047..71340 | - | 294 | WP_000987497 | DUF1778 domain-containing protein | - |
| DAY16_RS23970 (DAY16_023965) | 71429..71587 | - | 159 | WP_001644829 | hypothetical protein | - |
| DAY16_RS23975 (DAY16_023970) | 71812..72465 | + | 654 | WP_024153778 | DUF5710 domain-containing protein | - |
| DAY16_RS24880 | 72873..72968 | + | 96 | WP_000247680 | DinQ-like type I toxin DqlB | - |
| DAY16_RS23980 (DAY16_023975) | 73112..74410 | + | 1299 | WP_024153777 | hypothetical protein | trbA |
| DAY16_RS23985 (DAY16_023980) | 74501..75520 | + | 1020 | WP_024153776 | thioredoxin fold domain-containing protein | trbB |
| DAY16_RS23990 (DAY16_023985) | 75507..77702 | + | 2196 | WP_024153775 | F-type conjugative transfer protein TrbC | - |
| DAY16_RS23995 (DAY16_023990) | 77761..78300 | + | 540 | WP_026037017 | phospholipase D family protein | - |
| DAY16_RS24000 (DAY16_023995) | 78395..78958 | + | 564 | WP_023230347 | DUF2913 family protein | - |
| DAY16_RS24005 (DAY16_024000) | 79527..80123 | - | 597 | WP_000928861 | dienelactone hydrolase family protein | - |