T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 1..17550
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GJ28_RS22160 (GJ28_22150) | 1..633 | + | 633 | WP_031570456 | type-F conjugative transfer system protein TraW | traW |
| GJ28_RS22165 (GJ28_22155) | 630..1622 | + | 993 | WP_001712363 | conjugal transfer pilus assembly protein TraU | traU |
| GJ28_RS22170 (GJ28_22160) | 1651..1986 | + | 336 | WP_031570459 | hypothetical protein | - |
| GJ28_RS22175 (GJ28_22165) | 1979..2431 | + | 453 | WP_031570461 | hypothetical protein | - |
| GJ28_RS22180 (GJ28_22170) | 2459..3097 | + | 639 | WP_031570464 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| GJ28_RS22185 (GJ28_22175) | 3094..4902 | + | 1809 | WP_031570468 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| GJ28_RS22190 (GJ28_22180) | 4929..5158 | + | 230 | Protein_7 | conjugal transfer protein TrbE | - |
| GJ28_RS22195 (GJ28_22185) | 5151..5894 | + | 744 | WP_031570470 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| GJ28_RS22200 (GJ28_22190) | 6508..7473 | - | 966 | WP_259399387 | hypothetical protein | - |
| GJ28_RS22205 (GJ28_22195) | 7530..7808 | + | 279 | WP_031570473 | type-F conjugative transfer system pilin chaperone TraQ | - |
| GJ28_RS22210 (GJ28_22200) | 7795..8349 | + | 555 | WP_031570475 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| GJ28_RS22215 (GJ28_22205) | 8279..8620 | + | 342 | WP_072010162 | P-type conjugative transfer protein TrbJ | - |
| GJ28_RS22220 (GJ28_22210) | 8607..8999 | + | 393 | WP_031570480 | F-type conjugal transfer protein TrbF | - |
| GJ28_RS22225 (GJ28_22215) | 8986..10359 | + | 1374 | WP_031570483 | conjugal transfer pilus assembly protein TraH | traH |
| GJ28_RS22230 (GJ28_22220) | 10356..13175 | + | 2820 | WP_031570486 | conjugal transfer mating-pair stabilization protein TraG | traG |
| GJ28_RS22235 (GJ28_22225) | 13178..13489 | - | 312 | WP_031570490 | heavy metal-binding domain-containing protein | - |
| GJ28_RS22240 (GJ28_22230) | 13643..14431 | + | 789 | WP_031615778 | hypothetical protein | - |
| GJ28_RS22245 (GJ28_22235) | 14607..15341 | + | 735 | WP_031570496 | hypothetical protein | - |
| GJ28_RS22250 (GJ28_22240) | 15397..17550 | + | 2154 | WP_031570500 | type IV conjugative transfer system coupling protein TraD | virb4 |
| GJ28_RS22255 (GJ28_22245) | 17559..17957 | - | 399 | WP_001377646 | type II toxin-antitoxin system VapC family toxin | - |
| GJ28_RS22260 (GJ28_22250) | 17957..18184 | - | 228 | WP_000450532 | toxin-antitoxin system antitoxin VapB | - |