T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 43107..76188
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DAY14_RS25080 (DAY14_025085) | 38234..39202 | + | 969 | WP_051142412 | TcpQ domain-containing protein | - |
| DAY14_RS25085 (DAY14_025090) | 39202..39633 | + | 432 | WP_001644787 | type IV pilus biogenesis protein PilM | - |
| DAY14_RS25090 (DAY14_025095) | 39648..41270 | + | 1623 | WP_077957289 | PilN family type IVB pilus formation outer membrane protein | - |
| DAY14_RS25095 (DAY14_025100) | 41275..42558 | + | 1284 | WP_024153801 | type 4b pilus protein PilO2 | - |
| DAY14_RS25100 (DAY14_025105) | 42545..43075 | + | 531 | WP_024153800 | type IV pilus biogenesis protein PilP | - |
| DAY14_RS25105 (DAY14_025110) | 43107..44606 | + | 1500 | WP_001644792 | GspE/PulE family protein | virB11 |
| DAY14_RS25110 (DAY14_025115) | 44599..45714 | + | 1116 | WP_181377225 | type II secretion system F family protein | - |
| DAY14_RS25115 (DAY14_025120) | 45740..46333 | + | 594 | WP_024153799 | type 4 pilus major pilin | - |
| DAY14_RS25120 (DAY14_025125) | 46347..46817 | + | 471 | WP_023208005 | lytic transglycosylase domain-containing protein | virB1 |
| DAY14_RS25125 (DAY14_025130) | 46817..47428 | + | 612 | WP_024153798 | prepilin peptidase | - |
| DAY14_RS25130 (DAY14_025135) | 47527..48831 | + | 1305 | WP_042836862 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| DAY14_RS25135 (DAY14_025140) | 48915..49298 | - | 384 | Protein_45 | phage tail protein | - |
| DAY14_RS25140 (DAY14_025145) | 49386..50540 | + | 1155 | WP_000089546 | site-specific integrase | - |
| DAY14_RS25145 (DAY14_025150) | 50665..51120 | + | 456 | WP_000775487 | DotD/TraH family lipoprotein | - |
| DAY14_RS25150 (DAY14_025155) | 51117..51938 | + | 822 | WP_000213330 | type IV secretory system conjugative DNA transfer family protein | traI |
| DAY14_RS25155 (DAY14_025160) | 51935..53104 | + | 1170 | WP_024153796 | plasmid transfer ATPase TraJ | virB11 |
| DAY14_RS25160 (DAY14_025165) | 53094..53360 | + | 267 | WP_024153795 | IcmT/TraK family protein | traK |
| DAY14_RS25165 (DAY14_025170) | 53372..56821 | + | 3450 | WP_070799689 | DUF5710 domain-containing protein | - |
| DAY14_RS25170 (DAY14_025175) | 56837..57307 | + | 471 | WP_000735118 | hypothetical protein | traL |
| DAY14_RS25175 (DAY14_025180) | 57370..58047 | + | 678 | WP_024153792 | DotI/IcmL/TraM family protein | traM |
| DAY14_RS25180 (DAY14_025185) | 58044..59072 | + | 1029 | WP_024153791 | DotH/IcmK family type IV secretion protein | traN |
| DAY14_RS25185 (DAY14_025190) | 59072..60274 | + | 1203 | WP_024153790 | conjugal transfer protein TraO | traO |
| DAY14_RS25190 (DAY14_025195) | 60271..61026 | + | 756 | WP_024153789 | hypothetical protein | traP |
| DAY14_RS25195 (DAY14_025200) | 61036..61566 | + | 531 | WP_000348307 | conjugal transfer protein TraQ | traQ |
| DAY14_RS25200 (DAY14_025205) | 61582..61980 | + | 399 | WP_000404336 | DUF6750 family protein | traR |
| DAY14_RS25205 (DAY14_025210) | 62038..62490 | + | 453 | WP_024153787 | hypothetical protein | - |
| DAY14_RS25210 (DAY14_025215) | 62595..62897 | + | 303 | WP_024153786 | hypothetical protein | - |
| DAY14_RS25215 (DAY14_025220) | 62953..63561 | + | 609 | WP_024153785 | hypothetical protein | traT |
| DAY14_RS25220 (DAY14_025225) | 63558..66620 | + | 3063 | WP_024153784 | conjugal transfer protein | traU |
| DAY14_RS25225 (DAY14_025230) | 66639..67859 | + | 1221 | WP_024153783 | conjugal transfer protein TraW | traW |
| DAY14_RS25230 (DAY14_025235) | 67856..68374 | + | 519 | WP_024153782 | conjugal transfer protein TraX | - |
| DAY14_RS25235 (DAY14_025240) | 68426..70558 | + | 2133 | WP_024153781 | DotA/TraY family protein | traY |
| DAY14_RS25240 (DAY14_025245) | 70569..71114 | + | 546 | WP_024153780 | hypothetical protein | - |
| DAY14_RS25245 (DAY14_025250) | 71216..71731 | - | 516 | WP_023228531 | GNAT family N-acetyltransferase | - |
| DAY14_RS25250 (DAY14_025255) | 71715..72008 | - | 294 | WP_000987497 | DUF1778 domain-containing protein | - |
| DAY14_RS25255 (DAY14_025260) | 72097..72255 | - | 159 | WP_001644829 | hypothetical protein | - |
| DAY14_RS25260 (DAY14_025265) | 72480..73133 | + | 654 | WP_024153778 | DUF5710 domain-containing protein | - |
| DAY14_RS26200 | 73541..73636 | + | 96 | WP_000247680 | DinQ-like type I toxin DqlB | - |
| DAY14_RS25265 (DAY14_025270) | 73780..75078 | + | 1299 | WP_024153777 | hypothetical protein | trbA |
| DAY14_RS25270 (DAY14_025275) | 75169..76188 | + | 1020 | WP_024153776 | thioredoxin fold domain-containing protein | trbB |
| DAY14_RS25275 (DAY14_025280) | 76175..78370 | + | 2196 | WP_024153775 | F-type conjugative transfer protein TrbC | - |
| DAY14_RS25280 (DAY14_025285) | 78429..78968 | + | 540 | WP_026037017 | phospholipase D family protein | - |
| DAY14_RS25285 (DAY14_025290) | 79063..79626 | + | 564 | WP_023230347 | DUF2913 family protein | - |
| DAY14_RS25290 (DAY14_025295) | 80195..80791 | - | 597 | WP_000928861 | dienelactone hydrolase family protein | - |