T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 94640..130781
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NYQ90_RS22690 (NYQ90_22690) | 89702..90769 | + | 1068 | WP_001360287 | type IV pilus biogenesis lipoprotein PilL | - |
| NYQ90_RS22695 (NYQ90_22695) | 90769..91206 | + | 438 | WP_000539807 | type IV pilus biogenesis protein PilM | - |
| NYQ90_RS22700 (NYQ90_22700) | 91220..92902 | + | 1683 | WP_000748143 | PilN family type IVB pilus formation outer membrane protein | - |
| NYQ90_RS22705 (NYQ90_22705) | 92895..94190 | + | 1296 | WP_001545757 | type 4b pilus protein PilO2 | - |
| NYQ90_RS22710 (NYQ90_22710) | 94177..94629 | + | 453 | WP_001247331 | type IV pilus biogenesis protein PilP | - |
| NYQ90_RS22715 (NYQ90_22715) | 94640..96193 | + | 1554 | WP_000362206 | GspE/PulE family protein | virB11 |
| NYQ90_RS22720 (NYQ90_22720) | 96206..97291 | + | 1086 | WP_001208802 | type II secretion system F family protein | - |
| NYQ90_RS22725 (NYQ90_22725) | 97308..97922 | + | 615 | WP_000908226 | type 4 pilus major pilin | - |
| NYQ90_RS22730 (NYQ90_22730) | 97932..98492 | + | 561 | WP_000014005 | lytic transglycosylase domain-containing protein | virB1 |
| NYQ90_RS22735 (NYQ90_22735) | 98477..99133 | + | 657 | WP_001193549 | A24 family peptidase | - |
| NYQ90_RS22740 (NYQ90_22740) | 99133..100425 | + | 1293 | WP_001350014 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| NYQ90_RS22745 (NYQ90_22745) | 100481..100606 | - | 126 | Protein_88 | transposase | - |
| NYQ90_RS22750 (NYQ90_22750) | 100814..101638 | + | 825 | WP_001238942 | conjugal transfer protein TraE | traE |
| NYQ90_RS22755 (NYQ90_22755) | 101724..102926 | + | 1203 | WP_000976348 | conjugal transfer protein TraF | - |
| NYQ90_RS22760 (NYQ90_22760) | 102986..103570 | + | 585 | WP_000977522 | histidine phosphatase family protein | - |
| NYQ90_RS22765 (NYQ90_22765) | 103965..104423 | + | 459 | WP_001079808 | IncI1-type conjugal transfer lipoprotein TraH | - |
| NYQ90_RS22770 (NYQ90_22770) | 104420..105238 | + | 819 | WP_000646097 | IncI1-type conjugal transfer lipoprotein TraI | traI |
| NYQ90_RS22775 (NYQ90_22775) | 105235..106383 | + | 1149 | WP_001024972 | plasmid transfer ATPase TraJ | virB11 |
| NYQ90_RS22780 (NYQ90_22780) | 106380..106670 | + | 291 | WP_001299214 | hypothetical protein | traK |
| NYQ90_RS22785 (NYQ90_22785) | 106685..107236 | + | 552 | WP_000014584 | phospholipase D family protein | - |
| NYQ90_RS22790 (NYQ90_22790) | 107326..111093 | + | 3768 | WP_001141542 | LPD7 domain-containing protein | - |
| NYQ90_RS22795 (NYQ90_22795) | 111111..111458 | + | 348 | WP_001055900 | conjugal transfer protein | traL |
| NYQ90_RS22800 (NYQ90_22800) | 111455..112147 | + | 693 | WP_000138552 | DotI/IcmL family type IV secretion protein | traM |
| NYQ90_RS22805 (NYQ90_22805) | 112158..113141 | + | 984 | WP_001191878 | IncI1-type conjugal transfer protein TraN | traN |
| NYQ90_RS22810 (NYQ90_22810) | 113144..114433 | + | 1290 | WP_001271997 | conjugal transfer protein TraO | traO |
| NYQ90_RS22815 (NYQ90_22815) | 114433..115137 | + | 705 | WP_000801920 | IncI1-type conjugal transfer protein TraP | traP |
| NYQ90_RS22820 (NYQ90_22820) | 115137..115664 | + | 528 | WP_001055569 | conjugal transfer protein TraQ | traQ |
| NYQ90_RS22825 (NYQ90_22825) | 115715..116119 | + | 405 | WP_000086961 | IncI1-type conjugal transfer protein TraR | traR |
| NYQ90_RS22830 (NYQ90_22830) | 116183..116371 | + | 189 | WP_001277255 | putative conjugal transfer protein TraS | - |
| NYQ90_RS22835 (NYQ90_22835) | 116355..117155 | + | 801 | WP_001164788 | IncI1-type conjugal transfer protein TraT | traT |
| NYQ90_RS22840 (NYQ90_22840) | 117245..120289 | + | 3045 | WP_001024780 | IncI1-type conjugal transfer protein TraU | traU |
| NYQ90_RS22845 (NYQ90_22845) | 120289..120903 | + | 615 | WP_000337400 | IncI1-type conjugal transfer protein TraV | traV |
| NYQ90_RS22850 (NYQ90_22850) | 120870..122072 | + | 1203 | WP_001189156 | IncI1-type conjugal transfer protein TraW | traW |
| NYQ90_RS22855 (NYQ90_22855) | 122101..122685 | + | 585 | WP_001037987 | IncI1-type conjugal transfer protein TraX | - |
| NYQ90_RS22860 (NYQ90_22860) | 122782..124950 | + | 2169 | WP_000698357 | DotA/TraY family protein | traY |
| NYQ90_RS22865 (NYQ90_22865) | 125024..125674 | + | 651 | WP_001178506 | plasmid IncI1-type surface exclusion protein ExcA | - |
| NYQ90_RS22870 (NYQ90_22870) | 125746..125955 | - | 210 | WP_000062603 | HEAT repeat domain-containing protein | - |
| NYQ90_RS22875 (NYQ90_22875) | 126347..126523 | + | 177 | WP_001054904 | hypothetical protein | - |
| NYQ90_RS23750 | 126588..126683 | - | 96 | WP_001303310 | DinQ-like type I toxin DqlB | - |
| NYQ90_RS22880 (NYQ90_22880) | 127315..127743 | + | 429 | WP_259382946 | hypothetical protein | - |
| NYQ90_RS22885 (NYQ90_22885) | 127899..128222 | + | 324 | WP_259382950 | hypothetical protein | - |
| NYQ90_RS22890 (NYQ90_22890) | 128484..129692 | + | 1209 | WP_000121273 | IncI1-type conjugal transfer protein TrbA | trbA |
| NYQ90_RS22895 (NYQ90_22895) | 129711..130781 | + | 1071 | WP_000151577 | IncI1-type conjugal transfer protein TrbB | trbB |
| NYQ90_RS22900 (NYQ90_22900) | 130774..133065 | + | 2292 | WP_001289276 | F-type conjugative transfer protein TrbC | - |