T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 36451..75474
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NYS49_RS24300 (NYS49_24300) | 34167..36458 | - | 2292 | WP_012783931 | F-type conjugative transfer protein TrbC | - |
| NYS49_RS24305 (NYS49_24305) | 36451..37521 | - | 1071 | WP_012783932 | IncI1-type conjugal transfer protein TrbB | trbB |
| NYS49_RS24310 (NYS49_24310) | 37540..38748 | - | 1209 | WP_001703845 | IncI1-type conjugal transfer protein TrbA | trbA |
| NYS49_RS24315 (NYS49_24315) | 39055..39834 | - | 780 | WP_275450201 | protein FinQ | - |
| NYS49_RS24320 (NYS49_24320) | 40461..40613 | + | 153 | WP_001387489 | Hok/Gef family protein | - |
| NYS49_RS24325 (NYS49_24325) | 40685..40936 | - | 252 | WP_001291964 | hypothetical protein | - |
| NYS49_RS24745 | 41437..41532 | + | 96 | WP_000609148 | DinQ-like type I toxin DqlB | - |
| NYS49_RS24335 (NYS49_24335) | 41597..41773 | - | 177 | WP_001054900 | hypothetical protein | - |
| NYS49_RS24340 (NYS49_24340) | 42165..42374 | + | 210 | WP_000062603 | HEAT repeat domain-containing protein | - |
| NYS49_RS24345 (NYS49_24345) | 42446..43108 | - | 663 | WP_012783935 | plasmid IncI1-type surface exclusion protein ExcA | - |
| NYS49_RS24350 (NYS49_24350) | 43179..45347 | - | 2169 | WP_015508354 | DotA/TraY family protein | traY |
| NYS49_RS24355 (NYS49_24355) | 45444..46028 | - | 585 | WP_012783937 | conjugal transfer protein TraX | - |
| NYS49_RS24360 (NYS49_24360) | 46057..47259 | - | 1203 | WP_012783938 | IncI1-type conjugal transfer protein TraW | traW |
| NYS49_RS24365 (NYS49_24365) | 47226..47840 | - | 615 | WP_000337394 | IncI1-type conjugal transfer protein TraV | traV |
| NYS49_RS24370 (NYS49_24370) | 47840..50884 | - | 3045 | WP_012783939 | IncI1-type conjugal transfer protein TraU | traU |
| NYS49_RS24375 (NYS49_24375) | 50974..51774 | - | 801 | WP_001164788 | IncI1-type conjugal transfer protein TraT | traT |
| NYS49_RS24380 (NYS49_24380) | 51758..51946 | - | 189 | WP_001277255 | putative conjugal transfer protein TraS | - |
| NYS49_RS24385 (NYS49_24385) | 52010..52414 | - | 405 | WP_000086965 | IncI1-type conjugal transfer protein TraR | traR |
| NYS49_RS24390 (NYS49_24390) | 52465..52992 | - | 528 | WP_001055569 | conjugal transfer protein TraQ | traQ |
| NYS49_RS24395 (NYS49_24395) | 52992..53696 | - | 705 | WP_001493811 | IncI1-type conjugal transfer protein TraP | traP |
| NYS49_RS24400 (NYS49_24400) | 53696..54985 | - | 1290 | WP_011264042 | conjugal transfer protein TraO | traO |
| NYS49_RS24405 (NYS49_24405) | 54988..55971 | - | 984 | WP_001191880 | IncI1-type conjugal transfer protein TraN | traN |
| NYS49_RS24410 (NYS49_24410) | 55982..56674 | - | 693 | WP_000138552 | DotI/IcmL family type IV secretion protein | traM |
| NYS49_RS24415 (NYS49_24415) | 56671..57018 | - | 348 | WP_001055900 | conjugal transfer protein | traL |
| NYS49_RS24420 (NYS49_24420) | 57036..60803 | - | 3768 | WP_012783940 | LPD7 domain-containing protein | - |
| NYS49_RS24425 (NYS49_24425) | 60893..61444 | - | 552 | WP_012783942 | phospholipase D family protein | - |
| NYS49_RS24430 (NYS49_24430) | 61459..61749 | - | 291 | WP_001314267 | hypothetical protein | traK |
| NYS49_RS24435 (NYS49_24435) | 61746..62894 | - | 1149 | WP_001024971 | plasmid transfer ATPase TraJ | virB11 |
| NYS49_RS24440 (NYS49_24440) | 62891..63709 | - | 819 | WP_000646097 | IncI1-type conjugal transfer lipoprotein TraI | traI |
| NYS49_RS24445 (NYS49_24445) | 63706..64164 | - | 459 | WP_001079808 | IncI1-type conjugal transfer lipoprotein TraH | - |
| NYS49_RS24450 (NYS49_24450) | 64558..65142 | - | 585 | WP_000977522 | histidine phosphatase family protein | - |
| NYS49_RS24455 (NYS49_24455) | 65202..66404 | - | 1203 | WP_000976353 | conjugal transfer protein TraF | - |
| NYS49_RS24460 (NYS49_24460) | 66490..67314 | - | 825 | WP_001238932 | conjugal transfer protein TraE | traE |
| NYS49_RS24465 (NYS49_24465) | 67465..68619 | - | 1155 | WP_001139955 | tyrosine-type recombinase/integrase | - |
| NYS49_RS24470 (NYS49_24470) | 68618..68971 | + | 354 | WP_001393368 | hypothetical protein | - |
| NYS49_RS24475 (NYS49_24475) | 69346..69459 | - | 114 | Protein_79 | prepilin | - |
| NYS49_RS24480 (NYS49_24480) | 69820..70968 | - | 1149 | WP_259381968 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| NYS49_RS24485 (NYS49_24485) | 70968..71624 | - | 657 | WP_001193553 | prepilin peptidase | - |
| NYS49_RS24490 (NYS49_24490) | 71609..72169 | - | 561 | WP_000014116 | lytic transglycosylase domain-containing protein | virB1 |
| NYS49_RS24495 (NYS49_24495) | 72179..72793 | - | 615 | WP_001542527 | type 4 pilus major pilin | - |
| NYS49_RS24500 (NYS49_24500) | 72811..73908 | - | 1098 | WP_001492931 | type II secretion system F family protein | - |
| NYS49_RS24505 (NYS49_24505) | 73921..75474 | - | 1554 | WP_001492932 | GspE/PulE family protein | virB11 |
| NYS49_RS24510 (NYS49_24510) | 75485..75937 | - | 453 | WP_012783945 | type IV pilus biogenesis protein PilP | - |
| NYS49_RS24515 (NYS49_24515) | 75924..77219 | - | 1296 | WP_012783946 | type 4b pilus protein PilO2 | - |
| NYS49_RS24520 (NYS49_24520) | 77212..78894 | - | 1683 | WP_000748143 | PilN family type IVB pilus formation outer membrane protein | - |
| NYS49_RS24525 (NYS49_24525) | 78908..79345 | - | 438 | WP_000539807 | type IV pilus biogenesis protein PilM | - |
| NYS49_RS24530 (NYS49_24530) | 79345..80412 | - | 1068 | WP_012783947 | type IV pilus biogenesis lipoprotein PilL | - |