T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 10974..36100
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| TN42_RS27365 (TN42_23490) | 10974..13175 | - | 2202 | WP_023307203 | type IV conjugative transfer system coupling protein TraD | virb4 |
| TN42_RS31740 | 13309..13638 | - | 330 | WP_223856629 | hypothetical protein | - |
| TN42_RS31745 | 13646..13984 | - | 339 | WP_032072912 | tetratricopeptide repeat protein | - |
| TN42_RS27375 (TN42_23500) | 14059..14490 | - | 432 | WP_008324118 | entry exclusion protein | - |
| TN42_RS27380 (TN42_23505) | 14512..17334 | - | 2823 | WP_008324119 | conjugal transfer mating-pair stabilization protein TraG | traG |
| TN42_RS27385 (TN42_23510) | 17334..18704 | - | 1371 | WP_016247527 | conjugal transfer pilus assembly protein TraH | traH |
| TN42_RS27390 (TN42_23515) | 18691..19119 | - | 429 | WP_008324122 | hypothetical protein | - |
| TN42_RS27395 (TN42_23520) | 19112..19666 | - | 555 | WP_008324125 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| TN42_RS27400 (TN42_23525) | 19656..19904 | - | 249 | WP_008324126 | type-F conjugative transfer system pilin chaperone TraQ | - |
| TN42_RS27405 (TN42_23530) | 19921..20670 | - | 750 | WP_008324127 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| TN42_RS27410 (TN42_23535) | 20701..20889 | - | 189 | WP_008324128 | conjugal transfer protein TrbE | - |
| TN42_RS27415 (TN42_23540) | 20921..22774 | - | 1854 | WP_022652255 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| TN42_RS27420 (TN42_23545) | 22771..23400 | - | 630 | WP_008324130 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| TN42_RS27425 (TN42_23550) | 23417..24403 | - | 987 | WP_032160671 | conjugal transfer pilus assembly protein TraU | traU |
| TN42_RS27430 (TN42_23555) | 24406..25053 | - | 648 | WP_008324132 | type-F conjugative transfer system protein TraW | traW |
| TN42_RS27435 (TN42_23560) | 25053..25400 | - | 348 | WP_008324133 | type-F conjugative transfer system protein TrbI | - |
| TN42_RS27440 (TN42_23565) | 25397..28027 | - | 2631 | WP_008324134 | type IV secretion system protein TraC | virb4 |
| TN42_RS27445 (TN42_23570) | 28020..28586 | - | 567 | WP_008324135 | conjugal transfer pilus-stabilizing protein TraP | - |
| TN42_RS27450 (TN42_23575) | 28576..28977 | - | 402 | WP_008324137 | hypothetical protein | - |
| TN42_RS27455 (TN42_23580) | 28961..29146 | - | 186 | WP_022652254 | hypothetical protein | - |
| TN42_RS27460 (TN42_23585) | 29150..29374 | - | 225 | WP_008324141 | TraR/DksA C4-type zinc finger protein | - |
| TN42_RS27465 (TN42_23590) | 29494..30033 | - | 540 | WP_008324154 | type IV conjugative transfer system lipoprotein TraV | traV |
| TN42_RS27470 (TN42_23595) | 30055..31449 | - | 1395 | WP_008324156 | F-type conjugal transfer pilus assembly protein TraB | traB |
| TN42_RS27475 (TN42_23600) | 31436..32179 | - | 744 | WP_008324157 | type-F conjugative transfer system secretin TraK | traK |
| TN42_RS27480 (TN42_23605) | 32166..32732 | - | 567 | WP_008324158 | type IV conjugative transfer system protein TraE | traE |
| TN42_RS27485 (TN42_23610) | 32747..33052 | - | 306 | WP_008324160 | type IV conjugative transfer system protein TraL | traL |
| TN42_RS27490 (TN42_23615) | 33203..33553 | - | 351 | WP_008324162 | type IV conjugative transfer system pilin TraA | - |
| TN42_RS27495 (TN42_23620) | 33611..33835 | - | 225 | WP_008324165 | TraY domain-containing protein | - |
| TN42_RS27500 (TN42_23625) | 33922..34611 | - | 690 | WP_008324166 | hypothetical protein | - |
| TN42_RS27505 (TN42_23630) | 34800..35192 | - | 393 | WP_008324167 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| TN42_RS27510 (TN42_23635) | 35624..36100 | + | 477 | WP_008324168 | transglycosylase SLT domain-containing protein | virB1 |
| TN42_RS27515 (TN42_23640) | 36147..36677 | - | 531 | WP_008324170 | antirestriction protein | - |
| TN42_RS27520 (TN42_23645) | 37304..38134 | - | 831 | WP_022652253 | N-6 DNA methylase | - |
| TN42_RS27525 (TN42_23650) | 38177..38440 | - | 264 | WP_008324174 | hypothetical protein | - |
| TN42_RS27530 (TN42_23655) | 38526..38870 | - | 345 | WP_022652252 | hypothetical protein | - |
| TN42_RS27535 (TN42_23660) | 38917..39204 | - | 288 | WP_008324178 | hypothetical protein | - |
| TN42_RS27540 (TN42_23665) | 39258..39632 | - | 375 | WP_008324180 | hypothetical protein | - |
| TN42_RS27545 (TN42_29070) | 40353..40619 | - | 267 | WP_022652251 | hypothetical protein | - |
| TN42_RS27550 (TN42_23675) | 40681..41004 | - | 324 | WP_008324183 | hypothetical protein | - |