T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 43823..69043
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| TN42_RS25800 (TN42_24150) | 38950..39858 | - | 909 | WP_000739139 | hypothetical protein | - |
| TN42_RS25805 (TN42_24155) | 39869..40837 | - | 969 | WP_000085162 | AAA family ATPase | - |
| TN42_RS25810 (TN42_24160) | 41057..41242 | - | 186 | WP_001186917 | hypothetical protein | - |
| TN42_RS25815 (TN42_24165) | 41546..41866 | - | 321 | WP_000547566 | hypothetical protein | - |
| TN42_RS25820 (TN42_24170) | 42160..42801 | + | 642 | WP_000796664 | hypothetical protein | - |
| TN42_RS25825 (TN42_24175) | 42924..43784 | + | 861 | WP_000709517 | hypothetical protein | - |
| TN42_RS25830 (TN42_24180) | 43823..46621 | - | 2799 | WP_001256487 | conjugal transfer mating pair stabilization protein TraN | traN |
| TN42_RS31720 | 46737..46979 | - | 243 | WP_046155150 | TraU family protein | traU |
| TN42_RS25835 (TN42_19725) | 47005..47770 | - | 766 | WP_044702044 | TraU family protein | traU |
| TN42_RS25840 (TN42_19730) | 47770..48441 | - | 672 | WP_001337754 | EAL domain-containing protein | - |
| TN42_RS25845 (TN42_19735) | 48438..49703 | - | 1266 | WP_000621288 | TrbC family F-type conjugative pilus assembly protein | traW |
| TN42_RS25850 (TN42_19740) | 49666..50196 | - | 531 | WP_001010738 | S26 family signal peptidase | - |
| TN42_RS25855 (TN42_19745) | 50193..50510 | - | 318 | WP_000351984 | hypothetical protein | - |
| TN42_RS25860 (TN42_19750) | 50525..52972 | - | 2448 | WP_000637386 | type IV secretion system protein TraC | virb4 |
| TN42_RS25865 (TN42_19755) | 52969..53676 | - | 708 | WP_001259347 | DsbC family protein | - |
| TN42_RS25870 (TN42_19760) | 53825..59356 | - | 5532 | WP_000606833 | Ig-like domain-containing protein | - |
| TN42_RS25875 (TN42_19765) | 59557..59949 | - | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
| TN42_RS25880 (TN42_19770) | 59953..60531 | - | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
| TN42_RS25885 (TN42_19775) | 60528..61841 | - | 1314 | WP_024131605 | TraB/VirB10 family protein | traB |
| TN42_RS25890 (TN42_19780) | 61841..62758 | - | 918 | WP_000794249 | type-F conjugative transfer system secretin TraK | traK |
| TN42_RS25895 (TN42_19785) | 62742..63368 | - | 627 | WP_001049716 | TraE/TraK family type IV conjugative transfer system protein | traE |
| TN42_RS25900 (TN42_19790) | 63365..63646 | - | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
| TN42_RS25905 (TN42_19795) | 63791..64156 | - | 366 | WP_001052531 | hypothetical protein | - |
| TN42_RS31105 | 64168..64311 | - | 144 | WP_001275801 | hypothetical protein | - |
| TN42_RS25910 (TN42_19800) | 64492..65154 | - | 663 | WP_001231463 | hypothetical protein | - |
| TN42_RS25915 (TN42_19805) | 65154..65531 | - | 378 | WP_000869261 | hypothetical protein | - |
| TN42_RS25920 (TN42_19810) | 65541..65987 | - | 447 | WP_000122506 | hypothetical protein | - |
| TN42_RS25925 (TN42_19815) | 65997..66626 | - | 630 | WP_000743450 | DUF4400 domain-containing protein | tfc7 |
| TN42_RS25930 (TN42_19820) | 66583..67128 | - | 546 | WP_000228720 | hypothetical protein | - |
| TN42_RS25935 (TN42_19825) | 67178..69043 | - | 1866 | WP_000178856 | conjugative transfer system coupling protein TraD | virb4 |
| TN42_RS25940 (TN42_19830) | 69040..72018 | - | 2979 | WP_001337757 | MobH family relaxase | - |
| TN42_RS25945 (TN42_19835) | 72186..72803 | + | 618 | WP_001249396 | hypothetical protein | - |
| TN42_RS25950 (TN42_19840) | 72785..73018 | + | 234 | WP_001191892 | hypothetical protein | - |