T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 30567..41788
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RGC87_RS14545 (RGC87_14545) | 25630..26004 | + | 375 | Protein_30 | IS256 family transposase | - |
| RGC87_RS14550 (RGC87_14550) | 26061..26453 | + | 393 | WP_000393259 | GNAT family N-acetyltransferase | - |
| RGC87_RS14555 (RGC87_14555) | 26454..27737 | + | 1284 | Protein_32 | aminoglycoside N-acetyltransferase AAC(6')-Ie | - |
| RGC87_RS14560 (RGC87_14560) | 27739..28740 | - | 1002 | Protein_33 | IS256-like element IS256 family transposase | - |
| RGC87_RS14565 (RGC87_14565) | 28787..29161 | - | 375 | Protein_34 | IS256 family transposase | - |
| RGC87_RS14570 (RGC87_14570) | 29222..29896 | - | 675 | WP_001105984 | IS6-like element IS257 family transposase | - |
| RGC87_RS14575 (RGC87_14575) | 29934..30101 | - | 168 | WP_000869301 | hypothetical protein | - |
| RGC87_RS14580 (RGC87_14580) | 30158..30550 | - | 393 | WP_000608970 | single-stranded DNA-binding protein | - |
| RGC87_RS14585 (RGC87_14585) | 30567..31484 | - | 918 | WP_000383804 | conjugal transfer protein TrbL family protein | trsL |
| RGC87_RS14590 (RGC87_14590) | 31562..33202 | - | 1641 | WP_000209436 | VirD4-like conjugal transfer protein, CD1115 family | - |
| RGC87_RS14595 (RGC87_14595) | 33199..33663 | - | 465 | WP_000715273 | hypothetical protein | trsJ |
| RGC87_RS14600 (RGC87_14600) | 33679..35781 | - | 2103 | WP_001094109 | DNA topoisomerase III | - |
| RGC87_RS14605 (RGC87_14605) | 35797..36282 | - | 486 | WP_000735569 | TrsH/TraH family protein | - |
| RGC87_RS14610 (RGC87_14610) | 36292..37368 | - | 1077 | WP_000269385 | CHAP domain-containing protein | trsG |
| RGC87_RS14615 (RGC87_14615) | 37386..38666 | - | 1281 | WP_000702361 | membrane protein | trsF |
| RGC87_RS14620 (RGC87_14620) | 38678..40690 | - | 2013 | WP_309480399 | helicase HerA domain-containing protein | virb4 |
| RGC87_RS14625 (RGC87_14625) | 40711..41394 | - | 684 | WP_000979860 | TrsD/TraD family conjugative transfer protein | trsD |
| RGC87_RS14630 (RGC87_14630) | 41381..41788 | - | 408 | WP_000110157 | hypothetical protein | trsC |
| RGC87_RS14635 (RGC87_14635) | 41848..42165 | - | 318 | WP_000591622 | CagC family type IV secretion system protein | - |