T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 97793..107033
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H5D44_RS00520 (PMDKIKNG_00107) | 92936..93652 | - | 717 | WP_126508905 | zinc finger-like domain-containing protein | - |
| H5D44_RS00525 (PMDKIKNG_00108) | 93649..93849 | - | 201 | WP_000594930 | hypothetical protein | - |
| H5D44_RS00530 (PMDKIKNG_00109) | 93869..94921 | - | 1053 | WP_001065778 | hypothetical protein | - |
| H5D44_RS00535 (PMDKIKNG_00110) | 95398..96273 | + | 876 | WP_000594611 | RepB family plasmid replication initiator protein | - |
| H5D44_RS00540 (PMDKIKNG_00112) | 97422..97775 | + | 354 | WP_000423602 | hypothetical protein | - |
| H5D44_RS00545 (PMDKIKNG_00113) | 97793..98143 | + | 351 | WP_001447770 | type IV conjugative transfer system protein TraL | traL |
| H5D44_RS00550 (PMDKIKNG_00114) | 98155..98943 | + | 789 | WP_000783153 | TraE/TraK family type IV conjugative transfer system protein | traE |
| H5D44_RS00555 (PMDKIKNG_00115) | 98943..100214 | + | 1272 | WP_000592092 | type-F conjugative transfer system secretin TraK | traK |
| H5D44_RS00560 (PMDKIKNG_00116) | 100216..100677 | + | 462 | WP_000521242 | plasmid transfer protein HtdO | - |
| H5D44_RS00565 (PMDKIKNG_00117) | 100667..102022 | + | 1356 | WP_000351841 | IncHI-type conjugal transfer protein TrhB | traB |
| H5D44_RS00570 (PMDKIKNG_00118) | 102030..102512 | + | 483 | WP_000377632 | hypothetical protein | - |
| H5D44_RS00575 (PMDKIKNG_00119) | 102631..103383 | + | 753 | WP_185812388 | protein-disulfide isomerase HtdT | - |
| H5D44_RS00580 (PMDKIKNG_00120) | 103393..104343 | + | 951 | WP_001022588 | IncHI-type conjugal transfer lipoprotein TrhV | traV |
| H5D44_RS00585 (PMDKIKNG_00121) | 104352..107033 | + | 2682 | WP_000387412 | TraC family protein | virb4 |
| H5D44_RS00590 | 109582..109743 | + | 162 | WP_001371949 | hypothetical protein | - |