T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 31378..61057
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LB584_RS24015 (LB584_24030) | 26424..26774 | + | 351 | WP_014386186 | hypothetical protein | - |
| LB584_RS24020 (LB584_24035) | 27411..27737 | + | 327 | WP_014386187 | hypothetical protein | - |
| LB584_RS24025 (LB584_24040) | 27799..28011 | + | 213 | WP_014386188 | hypothetical protein | - |
| LB584_RS24030 (LB584_24045) | 28022..28246 | + | 225 | WP_014386189 | hypothetical protein | - |
| LB584_RS24035 (LB584_24050) | 28327..28647 | + | 321 | WP_014386190 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LB584_RS24040 (LB584_24055) | 28637..28915 | + | 279 | WP_004152721 | helix-turn-helix transcriptional regulator | - |
| LB584_RS24045 (LB584_24060) | 28916..29329 | + | 414 | WP_013023817 | helix-turn-helix domain-containing protein | - |
| LB584_RS24050 (LB584_24065) | 30162..30983 | + | 822 | WP_004182076 | DUF932 domain-containing protein | - |
| LB584_RS24055 (LB584_24070) | 31016..31345 | + | 330 | WP_014386191 | DUF5983 family protein | - |
| LB584_RS24060 (LB584_24075) | 31378..31863 | - | 486 | WP_004178063 | transglycosylase SLT domain-containing protein | virB1 |
| LB584_RS24065 (LB584_24080) | 32254..32670 | + | 417 | WP_072145360 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| LB584_RS24070 (LB584_24085) | 32863..33582 | + | 720 | WP_014386192 | conjugal transfer protein | - |
| LB584_RS24075 (LB584_24090) | 33715..33921 | + | 207 | WP_171773970 | TraY domain-containing protein | - |
| LB584_RS24080 (LB584_24095) | 33983..34351 | + | 369 | WP_004194426 | type IV conjugative transfer system pilin TraA | - |
| LB584_RS24085 (LB584_24100) | 34365..34670 | + | 306 | WP_004144424 | type IV conjugative transfer system protein TraL | traL |
| LB584_RS24090 (LB584_24105) | 34690..35256 | + | 567 | WP_004152602 | type IV conjugative transfer system protein TraE | traE |
| LB584_RS24095 (LB584_24110) | 35243..35983 | + | 741 | WP_014386193 | type-F conjugative transfer system secretin TraK | traK |
| LB584_RS24100 (LB584_24115) | 35983..37407 | + | 1425 | WP_014386194 | F-type conjugal transfer pilus assembly protein TraB | traB |
| LB584_RS24105 (LB584_24120) | 37400..37972 | + | 573 | WP_014386195 | conjugal transfer pilus-stabilizing protein TraP | - |
| LB584_RS24110 (LB584_24125) | 38019..38603 | + | 585 | WP_014386196 | type IV conjugative transfer system lipoprotein TraV | traV |
| LB584_RS24115 (LB584_24130) | 38734..39144 | + | 411 | WP_014386197 | hypothetical protein | - |
| LB584_RS24120 (LB584_24135) | 39149..39439 | + | 291 | WP_014386198 | hypothetical protein | - |
| LB584_RS24125 (LB584_24140) | 39463..39681 | + | 219 | WP_014386199 | hypothetical protein | - |
| LB584_RS24130 (LB584_24145) | 39682..39993 | + | 312 | WP_014386200 | hypothetical protein | - |
| LB584_RS24135 (LB584_24150) | 40060..40476 | + | 417 | WP_032408906 | hypothetical protein | - |
| LB584_RS24140 (LB584_24155) | 40841..41239 | + | 399 | WP_014343490 | hypothetical protein | - |
| LB584_RS24145 (LB584_24160) | 41311..43950 | + | 2640 | WP_013214024 | type IV secretion system protein TraC | virb4 |
| LB584_RS24150 (LB584_24165) | 43950..44339 | + | 390 | WP_013214025 | type-F conjugative transfer system protein TrbI | - |
| LB584_RS24155 (LB584_24170) | 44339..44974 | + | 636 | WP_013214026 | type-F conjugative transfer system protein TraW | traW |
| LB584_RS24160 (LB584_24175) | 45009..45410 | + | 402 | WP_004194979 | hypothetical protein | - |
| LB584_RS24165 (LB584_24180) | 45407..46396 | + | 990 | WP_013214027 | conjugal transfer pilus assembly protein TraU | traU |
| LB584_RS24170 (LB584_24185) | 46409..47047 | + | 639 | WP_004193871 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| LB584_RS24175 (LB584_24190) | 47106..49061 | + | 1956 | WP_014343489 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| LB584_RS24180 (LB584_24195) | 49093..49347 | + | 255 | WP_004152674 | conjugal transfer protein TrbE | - |
| LB584_RS24185 (LB584_24200) | 49325..49573 | + | 249 | WP_013214029 | hypothetical protein | - |
| LB584_RS24190 (LB584_24205) | 49586..49912 | + | 327 | WP_013214030 | hypothetical protein | - |
| LB584_RS24195 (LB584_24210) | 49933..50685 | + | 753 | WP_004152677 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| LB584_RS24200 (LB584_24215) | 50696..50935 | + | 240 | WP_032440623 | type-F conjugative transfer system pilin chaperone TraQ | - |
| LB584_RS24205 (LB584_24220) | 50907..51464 | + | 558 | WP_013214031 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| LB584_RS24210 (LB584_24225) | 51510..51953 | + | 444 | WP_013214032 | F-type conjugal transfer protein TrbF | - |
| LB584_RS24215 (LB584_24230) | 51931..53310 | + | 1380 | WP_072157884 | conjugal transfer pilus assembly protein TraH | traH |
| LB584_RS24220 (LB584_24235) | 53310..56132 | + | 2823 | WP_013214034 | conjugal transfer mating-pair stabilization protein TraG | traG |
| LB584_RS24225 (LB584_24240) | 56155..56757 | + | 603 | WP_013214035 | conjugal transfer protein TraS | - |
| LB584_RS24230 (LB584_24245) | 57008..57739 | + | 732 | WP_013214036 | conjugal transfer complement resistance protein TraT | - |
| LB584_RS24235 (LB584_24250) | 57932..58621 | + | 690 | WP_014343485 | hypothetical protein | - |
| LB584_RS24240 (LB584_24255) | 58748..61057 | + | 2310 | WP_014386205 | type IV conjugative transfer system coupling protein TraD | virb4 |