T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 51365..91069
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DOE62_RS24755 (DOE62_24745) | 49081..51372 | - | 2292 | WP_001289271 | F-type conjugative transfer protein TrbC | - |
| DOE62_RS24760 (DOE62_24750) | 51365..52435 | - | 1071 | WP_000151575 | IncI1-type conjugal transfer protein TrbB | trbB |
| DOE62_RS24765 (DOE62_24755) | 52454..53662 | - | 1209 | WP_000121273 | IncI1-type conjugal transfer protein TrbA | trbA |
| DOE62_RS24770 (DOE62_24760) | 53954..54106 | + | 153 | WP_001303307 | Hok/Gef family protein | - |
| DOE62_RS24775 (DOE62_24765) | 54178..54429 | - | 252 | WP_001291965 | hypothetical protein | - |
| DOE62_RS24780 (DOE62_24770) | 54790..55572 | - | 783 | WP_001300609 | IS21-like element IS100kyp family helper ATPase IstB | - |
| DOE62_RS24785 (DOE62_24775) | 55569..56591 | - | 1023 | WP_001572805 | IS21-like element IS100 family transposase | - |
| DOE62_RS25420 | 57312..57488 | - | 177 | WP_001054900 | hypothetical protein | - |
| DOE62_RS24800 (DOE62_24790) | 57880..58089 | + | 210 | WP_000062603 | HEAT repeat domain-containing protein | - |
| DOE62_RS24805 (DOE62_24795) | 58161..58823 | - | 663 | WP_000644794 | plasmid IncI1-type surface exclusion protein ExcA | - |
| DOE62_RS24810 (DOE62_24800) | 58894..61062 | - | 2169 | WP_000698368 | DotA/TraY family protein | traY |
| DOE62_RS24815 (DOE62_24805) | 61159..61743 | - | 585 | WP_001037998 | conjugal transfer protein TraX | - |
| DOE62_RS24820 (DOE62_24810) | 61772..62974 | - | 1203 | WP_001189158 | IncI1-type conjugal transfer protein TraW | traW |
| DOE62_RS24825 (DOE62_24815) | 62941..63555 | - | 615 | WP_000337394 | IncI1-type conjugal transfer protein TraV | traV |
| DOE62_RS24830 (DOE62_24820) | 63555..66599 | - | 3045 | WP_001024751 | IncI1-type conjugal transfer protein TraU | traU |
| DOE62_RS24835 (DOE62_24825) | 66689..67489 | - | 801 | WP_001164788 | IncI1-type conjugal transfer protein TraT | traT |
| DOE62_RS24840 (DOE62_24830) | 67473..67661 | - | 189 | WP_001277255 | putative conjugal transfer protein TraS | - |
| DOE62_RS24845 (DOE62_24835) | 67725..68129 | - | 405 | WP_000086960 | IncI1-type conjugal transfer protein TraR | traR |
| DOE62_RS24850 (DOE62_24840) | 68180..68707 | - | 528 | WP_001055569 | conjugal transfer protein TraQ | traQ |
| DOE62_RS24855 (DOE62_24845) | 68707..69411 | - | 705 | WP_000801920 | IncI1-type conjugal transfer protein TraP | traP |
| DOE62_RS24860 (DOE62_24850) | 69411..70700 | - | 1290 | WP_001271997 | conjugal transfer protein TraO | traO |
| DOE62_RS24865 (DOE62_24855) | 70703..71686 | - | 984 | WP_001191878 | IncI1-type conjugal transfer protein TraN | traN |
| DOE62_RS24870 (DOE62_24860) | 71697..72389 | - | 693 | WP_000138552 | DotI/IcmL family type IV secretion protein | traM |
| DOE62_RS24875 (DOE62_24865) | 72386..72733 | - | 348 | WP_001055900 | conjugal transfer protein | traL |
| DOE62_RS24880 (DOE62_24870) | 72751..76518 | - | 3768 | WP_001141535 | LPD7 domain-containing protein | - |
| DOE62_RS24885 (DOE62_24875) | 76608..77159 | - | 552 | WP_000014584 | phospholipase D family protein | - |
| DOE62_RS24890 (DOE62_24880) | 77174..77464 | - | 291 | WP_001299214 | hypothetical protein | traK |
| DOE62_RS24895 (DOE62_24885) | 77461..78609 | - | 1149 | WP_001024972 | plasmid transfer ATPase TraJ | virB11 |
| DOE62_RS24900 (DOE62_24890) | 78606..79424 | - | 819 | WP_000646097 | IncI1-type conjugal transfer lipoprotein TraI | traI |
| DOE62_RS24905 (DOE62_24895) | 79421..79879 | - | 459 | WP_001079808 | IncI1-type conjugal transfer lipoprotein TraH | - |
| DOE62_RS24910 (DOE62_24900) | 80274..80858 | - | 585 | WP_000977517 | histidine phosphatase family protein | - |
| DOE62_RS24915 (DOE62_24905) | 80918..82120 | - | 1203 | WP_000976353 | conjugal transfer protein TraF | - |
| DOE62_RS24920 (DOE62_24910) | 82206..83030 | - | 825 | WP_001238927 | conjugal transfer protein TraE | traE |
| DOE62_RS24925 (DOE62_24915) | 83181..84335 | - | 1155 | WP_001139958 | tyrosine-type recombinase/integrase | - |
| DOE62_RS25935 (DOE62_24930) | 84921..85142 | + | 222 | Protein_95 | prepilin | - |
| DOE62_RS24945 (DOE62_24935) | 85139..86563 | - | 1425 | WP_023278060 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| DOE62_RS24950 (DOE62_24940) | 86563..87219 | - | 657 | WP_001193553 | prepilin peptidase | - |
| DOE62_RS24955 (DOE62_24945) | 87204..87764 | - | 561 | WP_000014116 | lytic transglycosylase domain-containing protein | virB1 |
| DOE62_RS24960 (DOE62_24950) | 87774..88388 | - | 615 | WP_000959785 | type 4 pilus major pilin | - |
| DOE62_RS24965 (DOE62_24955) | 88406..89503 | - | 1098 | WP_001208805 | type II secretion system F family protein | - |
| DOE62_RS24970 (DOE62_24960) | 89516..91069 | - | 1554 | WP_000362202 | GspE/PulE family protein | virB11 |
| DOE62_RS24975 (DOE62_24965) | 91080..91532 | - | 453 | WP_001247336 | type IV pilus biogenesis protein PilP | - |
| DOE62_RS24980 (DOE62_24970) | 91519..92814 | - | 1296 | WP_000752774 | type 4b pilus protein PilO2 | - |
| DOE62_RS24985 (DOE62_24975) | 92807..94489 | - | 1683 | WP_000748143 | PilN family type IVB pilus formation outer membrane protein | - |
| DOE62_RS24990 (DOE62_24980) | 94503..94940 | - | 438 | WP_000539807 | type IV pilus biogenesis protein PilM | - |
| DOE62_RS24995 (DOE62_24985) | 94940..96007 | - | 1068 | WP_000742600 | type IV pilus biogenesis lipoprotein PilL | - |