T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 48779..88483
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DOE64_RS24580 (DOE64_24570) | 46495..48786 | - | 2292 | WP_001289271 | F-type conjugative transfer protein TrbC | - |
| DOE64_RS24585 (DOE64_24575) | 48779..49849 | - | 1071 | WP_000151575 | IncI1-type conjugal transfer protein TrbB | trbB |
| DOE64_RS24590 (DOE64_24580) | 49868..51076 | - | 1209 | WP_000121273 | IncI1-type conjugal transfer protein TrbA | trbA |
| DOE64_RS24595 (DOE64_24585) | 51368..51520 | + | 153 | WP_001303307 | Hok/Gef family protein | - |
| DOE64_RS24600 (DOE64_24590) | 51592..51843 | - | 252 | WP_001291965 | hypothetical protein | - |
| DOE64_RS24605 (DOE64_24595) | 52204..52986 | - | 783 | WP_001300609 | IS21-like element IS100kyp family helper ATPase IstB | - |
| DOE64_RS24610 (DOE64_24600) | 52983..54005 | - | 1023 | WP_001572805 | IS21-like element IS100 family transposase | - |
| DOE64_RS25135 | 54726..54902 | - | 177 | WP_001054900 | hypothetical protein | - |
| DOE64_RS24625 (DOE64_24615) | 55294..55503 | + | 210 | WP_000062603 | HEAT repeat domain-containing protein | - |
| DOE64_RS24630 (DOE64_24620) | 55575..56237 | - | 663 | WP_000644794 | plasmid IncI1-type surface exclusion protein ExcA | - |
| DOE64_RS24635 (DOE64_24625) | 56308..58476 | - | 2169 | WP_000698368 | DotA/TraY family protein | traY |
| DOE64_RS24640 (DOE64_24630) | 58573..59157 | - | 585 | WP_001037998 | conjugal transfer protein TraX | - |
| DOE64_RS24645 (DOE64_24635) | 59186..60388 | - | 1203 | WP_001189158 | IncI1-type conjugal transfer protein TraW | traW |
| DOE64_RS24650 (DOE64_24640) | 60355..60969 | - | 615 | WP_000337394 | IncI1-type conjugal transfer protein TraV | traV |
| DOE64_RS24655 (DOE64_24645) | 60969..64013 | - | 3045 | WP_001024751 | IncI1-type conjugal transfer protein TraU | traU |
| DOE64_RS24660 (DOE64_24650) | 64103..64903 | - | 801 | WP_001164788 | IncI1-type conjugal transfer protein TraT | traT |
| DOE64_RS24665 (DOE64_24655) | 64887..65075 | - | 189 | WP_001277255 | putative conjugal transfer protein TraS | - |
| DOE64_RS24670 (DOE64_24660) | 65139..65543 | - | 405 | WP_000086960 | IncI1-type conjugal transfer protein TraR | traR |
| DOE64_RS24675 (DOE64_24665) | 65594..66121 | - | 528 | WP_001055569 | conjugal transfer protein TraQ | traQ |
| DOE64_RS24680 (DOE64_24670) | 66121..66825 | - | 705 | WP_000801920 | IncI1-type conjugal transfer protein TraP | traP |
| DOE64_RS24685 (DOE64_24675) | 66825..68114 | - | 1290 | WP_001271997 | conjugal transfer protein TraO | traO |
| DOE64_RS24690 (DOE64_24680) | 68117..69100 | - | 984 | WP_001191878 | IncI1-type conjugal transfer protein TraN | traN |
| DOE64_RS24695 (DOE64_24685) | 69111..69803 | - | 693 | WP_000138552 | DotI/IcmL family type IV secretion protein | traM |
| DOE64_RS24700 (DOE64_24690) | 69800..70147 | - | 348 | WP_001055900 | conjugal transfer protein | traL |
| DOE64_RS24705 (DOE64_24695) | 70165..73932 | - | 3768 | WP_001141535 | LPD7 domain-containing protein | - |
| DOE64_RS24710 (DOE64_24700) | 74022..74573 | - | 552 | WP_000014584 | phospholipase D family protein | - |
| DOE64_RS24715 (DOE64_24705) | 74588..74878 | - | 291 | WP_001299214 | hypothetical protein | traK |
| DOE64_RS24720 (DOE64_24710) | 74875..76023 | - | 1149 | WP_001024972 | plasmid transfer ATPase TraJ | virB11 |
| DOE64_RS24725 (DOE64_24715) | 76020..76838 | - | 819 | WP_000646097 | IncI1-type conjugal transfer lipoprotein TraI | traI |
| DOE64_RS24730 (DOE64_24720) | 76835..77293 | - | 459 | WP_001079808 | IncI1-type conjugal transfer lipoprotein TraH | - |
| DOE64_RS24735 (DOE64_24725) | 77688..78272 | - | 585 | WP_000977517 | histidine phosphatase family protein | - |
| DOE64_RS24740 (DOE64_24730) | 78332..79534 | - | 1203 | WP_000976353 | conjugal transfer protein TraF | - |
| DOE64_RS24745 (DOE64_24735) | 79620..80444 | - | 825 | WP_001238927 | conjugal transfer protein TraE | traE |
| DOE64_RS24750 (DOE64_24740) | 80595..81749 | - | 1155 | WP_001139958 | tyrosine-type recombinase/integrase | - |
| DOE64_RS25585 (DOE64_24755) | 82335..82556 | + | 222 | Protein_93 | prepilin | - |
| DOE64_RS24770 (DOE64_24760) | 82553..83977 | - | 1425 | WP_023278060 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| DOE64_RS24775 (DOE64_24765) | 83977..84633 | - | 657 | WP_001193553 | prepilin peptidase | - |
| DOE64_RS24780 (DOE64_24770) | 84618..85178 | - | 561 | WP_000014116 | lytic transglycosylase domain-containing protein | virB1 |
| DOE64_RS24785 (DOE64_24775) | 85188..85802 | - | 615 | WP_000959785 | type 4 pilus major pilin | - |
| DOE64_RS24790 (DOE64_24780) | 85820..86917 | - | 1098 | WP_001208805 | type II secretion system F family protein | - |
| DOE64_RS24795 (DOE64_24785) | 86930..88483 | - | 1554 | WP_000362202 | GspE/PulE family protein | virB11 |
| DOE64_RS24800 (DOE64_24790) | 88494..88946 | - | 453 | WP_001247336 | type IV pilus biogenesis protein PilP | - |
| DOE64_RS24805 (DOE64_24795) | 88933..90228 | - | 1296 | WP_000752774 | type 4b pilus protein PilO2 | - |
| DOE64_RS24810 (DOE64_24800) | 90221..91903 | - | 1683 | WP_000748143 | PilN family type IVB pilus formation outer membrane protein | - |
| DOE64_RS24815 (DOE64_24805) | 91917..92354 | - | 438 | WP_000539807 | type IV pilus biogenesis protein PilM | - |
| DOE64_RS24820 (DOE64_24810) | 92354..93421 | - | 1068 | WP_000742600 | type IV pilus biogenesis lipoprotein PilL | - |