T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 30649..60328
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LB242_RS24460 (LB242_24480) | 30649..32958 | - | 2310 | WP_014386205 | type IV conjugative transfer system coupling protein TraD | virb4 |
| LB242_RS24465 (LB242_24485) | 33085..33774 | - | 690 | WP_014343485 | hypothetical protein | - |
| LB242_RS24470 (LB242_24490) | 33967..34698 | - | 732 | WP_013214036 | conjugal transfer complement resistance protein TraT | - |
| LB242_RS24475 (LB242_24495) | 34949..35551 | - | 603 | WP_013214035 | conjugal transfer protein TraS | - |
| LB242_RS24480 (LB242_24500) | 35574..38396 | - | 2823 | WP_013214034 | conjugal transfer mating-pair stabilization protein TraG | traG |
| LB242_RS24485 (LB242_24505) | 38396..39775 | - | 1380 | WP_268199485 | conjugal transfer pilus assembly protein TraH | traH |
| LB242_RS24490 (LB242_24510) | 39753..40196 | - | 444 | WP_013214032 | F-type conjugal transfer protein TrbF | - |
| LB242_RS24495 (LB242_24515) | 40242..40799 | - | 558 | WP_013214031 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| LB242_RS24500 (LB242_24520) | 40771..41010 | - | 240 | WP_032440623 | type-F conjugative transfer system pilin chaperone TraQ | - |
| LB242_RS24505 (LB242_24525) | 41021..41773 | - | 753 | WP_004152677 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| LB242_RS24510 (LB242_24530) | 41794..42120 | - | 327 | WP_013214030 | hypothetical protein | - |
| LB242_RS24515 (LB242_24535) | 42133..42381 | - | 249 | WP_013214029 | hypothetical protein | - |
| LB242_RS24520 (LB242_24540) | 42359..42613 | - | 255 | WP_004152674 | conjugal transfer protein TrbE | - |
| LB242_RS24525 (LB242_24545) | 42645..44600 | - | 1956 | WP_014343489 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| LB242_RS24530 (LB242_24550) | 44659..45297 | - | 639 | WP_004193871 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| LB242_RS24535 (LB242_24555) | 45310..46299 | - | 990 | WP_013214027 | conjugal transfer pilus assembly protein TraU | traU |
| LB242_RS24540 (LB242_24560) | 46296..46697 | - | 402 | WP_004194979 | hypothetical protein | - |
| LB242_RS24545 (LB242_24565) | 46732..47367 | - | 636 | WP_013214026 | type-F conjugative transfer system protein TraW | traW |
| LB242_RS24550 (LB242_24570) | 47367..47756 | - | 390 | WP_013214025 | type-F conjugative transfer system protein TrbI | - |
| LB242_RS24555 (LB242_24575) | 47756..50395 | - | 2640 | WP_013214024 | type IV secretion system protein TraC | virb4 |
| LB242_RS24560 (LB242_24580) | 50467..50865 | - | 399 | WP_014343490 | hypothetical protein | - |
| LB242_RS24565 (LB242_24585) | 51230..51646 | - | 417 | WP_032408906 | hypothetical protein | - |
| LB242_RS24570 (LB242_24590) | 51713..52024 | - | 312 | WP_014386200 | hypothetical protein | - |
| LB242_RS24575 (LB242_24595) | 52025..52243 | - | 219 | WP_014386199 | hypothetical protein | - |
| LB242_RS24580 (LB242_24600) | 52267..52557 | - | 291 | WP_014386198 | hypothetical protein | - |
| LB242_RS24585 (LB242_24605) | 52562..52972 | - | 411 | WP_014386197 | hypothetical protein | - |
| LB242_RS24590 (LB242_24610) | 53103..53687 | - | 585 | WP_014386196 | type IV conjugative transfer system lipoprotein TraV | traV |
| LB242_RS24595 (LB242_24615) | 53734..54306 | - | 573 | WP_014386195 | conjugal transfer pilus-stabilizing protein TraP | - |
| LB242_RS24600 (LB242_24620) | 54299..55723 | - | 1425 | WP_014386194 | F-type conjugal transfer pilus assembly protein TraB | traB |
| LB242_RS24605 (LB242_24625) | 55723..56463 | - | 741 | WP_014386193 | type-F conjugative transfer system secretin TraK | traK |
| LB242_RS24610 (LB242_24630) | 56450..57016 | - | 567 | WP_004152602 | type IV conjugative transfer system protein TraE | traE |
| LB242_RS24615 (LB242_24635) | 57036..57341 | - | 306 | WP_004144424 | type IV conjugative transfer system protein TraL | traL |
| LB242_RS24620 (LB242_24640) | 57355..57723 | - | 369 | WP_004194426 | type IV conjugative transfer system pilin TraA | - |
| LB242_RS24625 (LB242_24645) | 57785..57991 | - | 207 | WP_171773970 | TraY domain-containing protein | - |
| LB242_RS24630 (LB242_24650) | 58124..58843 | - | 720 | WP_014386192 | conjugal transfer protein | - |
| LB242_RS24635 (LB242_24655) | 59036..59452 | - | 417 | WP_072145360 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| LB242_RS24640 (LB242_24660) | 59843..60328 | + | 486 | WP_004178063 | transglycosylase SLT domain-containing protein | virB1 |
| LB242_RS24645 (LB242_24665) | 60361..60690 | - | 330 | WP_014386191 | DUF5983 family protein | - |
| LB242_RS24650 (LB242_24670) | 60723..61544 | - | 822 | WP_004182076 | DUF932 domain-containing protein | - |
| LB242_RS24655 (LB242_24675) | 62377..62790 | - | 414 | WP_013023817 | helix-turn-helix domain-containing protein | - |
| LB242_RS24660 (LB242_24680) | 62791..63069 | - | 279 | WP_004152721 | helix-turn-helix transcriptional regulator | - |
| LB242_RS24665 (LB242_24685) | 63059..63379 | - | 321 | WP_014386190 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LB242_RS24670 (LB242_24690) | 63460..63684 | - | 225 | WP_014386189 | hypothetical protein | - |
| LB242_RS24675 (LB242_24695) | 63695..63907 | - | 213 | WP_014386188 | hypothetical protein | - |
| LB242_RS24680 (LB242_24700) | 63969..64295 | - | 327 | WP_014386187 | hypothetical protein | - |
| LB242_RS24685 (LB242_24705) | 64932..65282 | - | 351 | WP_014386186 | hypothetical protein | - |