T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 106737..115827
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RI204_RS00555 | 101762..102127 | - | 366 | Protein_110 | LuxR family transcriptional regulator | - |
| RI204_RS00560 (HEEKMCJF_00114) | 102384..102701 | + | 318 | WP_000118520 | quaternary ammonium compound efflux SMR transporter SugE | - |
| RI204_RS00565 (HEEKMCJF_00115) | 102698..103231 | - | 534 | WP_001221666 | lipocalin family protein | - |
| RI204_RS00570 (HEEKMCJF_00116) | 103325..104470 | - | 1146 | WP_000976514 | extended-spectrum class C beta-lactamase CMY-2 | - |
| RI204_RS00575 (HEEKMCJF_00118) | 104794..106056 | - | 1263 | WP_000608644 | IS1380-like element ISEcp1 family transposase | - |
| RI204_RS00580 (HEEKMCJF_00119) | 106341..106733 | - | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
| RI204_RS00585 (HEEKMCJF_00120) | 106737..107315 | - | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
| RI204_RS00590 (HEEKMCJF_00121) | 107312..108625 | - | 1314 | WP_024131605 | TraB/VirB10 family protein | traB |
| RI204_RS00595 (HEEKMCJF_00122) | 108625..109542 | - | 918 | WP_000794249 | type-F conjugative transfer system secretin TraK | traK |
| RI204_RS00600 (HEEKMCJF_00123) | 109526..110152 | - | 627 | WP_001049717 | TraE/TraK family type IV conjugative transfer system protein | traE |
| RI204_RS00605 (HEEKMCJF_00124) | 110149..110430 | - | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
| RI204_RS00610 (HEEKMCJF_00125) | 110575..110940 | - | 366 | WP_001052530 | hypothetical protein | - |
| RI204_RS00615 (HEEKMCJF_00126) | 110952..111095 | - | 144 | WP_001275801 | hypothetical protein | - |
| RI204_RS00620 (HEEKMCJF_00127) | 111276..111938 | - | 663 | WP_001231464 | hypothetical protein | - |
| RI204_RS00625 (HEEKMCJF_00128) | 111938..112315 | - | 378 | WP_000869297 | hypothetical protein | - |
| RI204_RS00630 (HEEKMCJF_00129) | 112325..112771 | - | 447 | WP_000122507 | hypothetical protein | - |
| RI204_RS00635 (HEEKMCJF_00130) | 112781..113410 | - | 630 | WP_000743449 | DUF4400 domain-containing protein | tfc7 |
| RI204_RS00640 (HEEKMCJF_00131) | 113367..113951 | - | 585 | WP_000332868 | hypothetical protein | - |
| RI204_RS00645 (HEEKMCJF_00132) | 113962..115827 | - | 1866 | WP_000178857 | conjugative transfer system coupling protein TraD | virb4 |
| RI204_RS00650 (HEEKMCJF_00133) | 115824..118796 | - | 2973 | WP_064986968 | MobH family relaxase | - |
| RI204_RS00655 (HEEKMCJF_00134) | 118964..119581 | + | 618 | WP_001249396 | hypothetical protein | - |
| RI204_RS00660 | 119563..119796 | + | 234 | WP_001191892 | hypothetical protein | - |