T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 36253..75935
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RI195_RS00230 (pCL046-1_00044) | 33969..36260 | - | 2292 | WP_011264051 | F-type conjugative transfer protein TrbC | - |
| RI195_RS00235 (pCL046-1_00045) | 36253..37323 | - | 1071 | WP_000151590 | IncI1-type conjugal transfer protein TrbB | trbB |
| RI195_RS00240 (pCL046-1_00046) | 37342..38550 | - | 1209 | WP_107372241 | IncI1-type conjugal transfer protein TrbA | trbA |
| RI195_RS00245 (pCL046-1_00047) | 38857..39636 | - | 780 | WP_275450201 | protein FinQ | - |
| RI195_RS00250 (pCL046-1_00048) | 40263..40415 | + | 153 | WP_001387489 | Hok/Gef family protein | - |
| RI195_RS00255 (pCL046-1_00049) | 40487..40738 | - | 252 | WP_001291964 | hypothetical protein | - |
| RI195_RS00260 | 41239..41334 | + | 96 | WP_000609148 | DinQ-like type I toxin DqlB | - |
| RI195_RS00265 (pCL046-1_00051) | 41399..41575 | - | 177 | WP_001054898 | hypothetical protein | - |
| RI195_RS00270 (pCL046-1_00052) | 41941..42150 | + | 210 | WP_000062603 | HEAT repeat domain-containing protein | - |
| RI195_RS00275 (pCL046-1_00053) | 42222..42896 | - | 675 | WP_223866377 | plasmid IncI1-type surface exclusion protein ExcA | - |
| RI195_RS00280 (pCL046-1_00054) | 42946..45114 | - | 2169 | WP_001774191 | DotA/TraY family protein | traY |
| RI195_RS00285 (pCL046-1_00055) | 45211..45795 | - | 585 | WP_001037987 | IncI1-type conjugal transfer protein TraX | - |
| RI195_RS00290 (pCL046-1_00056) | 45824..47026 | - | 1203 | WP_107372242 | IncI1-type conjugal transfer protein TraW | traW |
| RI195_RS00295 (pCL046-1_00057) | 46993..47607 | - | 615 | WP_000337395 | IncI1-type conjugal transfer protein TraV | traV |
| RI195_RS00300 (pCL046-1_00058) | 47607..50651 | - | 3045 | WP_107372243 | IncI1-type conjugal transfer protein TraU | traU |
| RI195_RS00305 (pCL046-1_00059) | 50741..51541 | - | 801 | WP_107372244 | IncI1-type conjugal transfer protein TraT | traT |
| RI195_RS00310 (pCL046-1_00060) | 51525..51713 | - | 189 | WP_001277253 | putative conjugal transfer protein TraS | - |
| RI195_RS00315 (pCL046-1_00061) | 51777..52181 | - | 405 | WP_000086965 | IncI1-type conjugal transfer protein TraR | traR |
| RI195_RS00320 (pCL046-1_00062) | 52232..52759 | - | 528 | WP_001055569 | conjugal transfer protein TraQ | traQ |
| RI195_RS00325 (pCL046-1_00063) | 52759..53463 | - | 705 | WP_000801920 | IncI1-type conjugal transfer protein TraP | traP |
| RI195_RS00330 (pCL046-1_00064) | 53463..54752 | - | 1290 | WP_001271994 | conjugal transfer protein TraO | traO |
| RI195_RS00335 (pCL046-1_00065) | 54755..55738 | - | 984 | WP_001191879 | IncI1-type conjugal transfer protein TraN | traN |
| RI195_RS00340 (pCL046-1_00066) | 55749..56441 | - | 693 | WP_000138552 | DotI/IcmL family type IV secretion protein | traM |
| RI195_RS00345 (pCL046-1_00067) | 56438..56785 | - | 348 | WP_001055900 | conjugal transfer protein | traL |
| RI195_RS00350 (pCL046-1_00068) | 56803..60567 | - | 3765 | WP_001141540 | LPD7 domain-containing protein | - |
| RI195_RS00355 (pCL046-1_00069) | 60657..61208 | - | 552 | WP_000014586 | phospholipase D family protein | - |
| RI195_RS00360 (pCL046-1_00070) | 61223..61513 | - | 291 | WP_001314267 | hypothetical protein | traK |
| RI195_RS00365 (pCL046-1_00071) | 61510..62658 | - | 1149 | WP_001024972 | plasmid transfer ATPase TraJ | virB11 |
| RI195_RS00370 (pCL046-1_00072) | 62655..63473 | - | 819 | WP_097763371 | IncI1-type conjugal transfer lipoprotein TraI | traI |
| RI195_RS00375 (pCL046-1_00073) | 63470..63928 | - | 459 | WP_001079808 | IncI1-type conjugal transfer lipoprotein TraH | - |
| RI195_RS00380 (pCL046-1_00074) | 64323..64907 | - | 585 | WP_000977522 | histidine phosphatase family protein | - |
| RI195_RS00385 (pCL046-1_00075) | 64967..66169 | - | 1203 | WP_000976353 | conjugal transfer protein TraF | - |
| RI195_RS00390 (pCL046-1_00076) | 66255..67079 | - | 825 | WP_001545755 | conjugal transfer protein TraE | traE |
| RI195_RS00395 (pCL046-1_00077) | 67230..68384 | - | 1155 | WP_001139958 | tyrosine-type recombinase/integrase | - |
| RI195_RS00400 | 68368..68736 | + | 369 | WP_015059923 | hypothetical protein | - |
| RI195_RS00405 | 68841..68996 | + | 156 | WP_001302705 | hypothetical protein | - |
| RI195_RS00410 | 69905..70153 | + | 249 | WP_001349157 | hypothetical protein | - |
| RI195_RS00415 (pCL046-1_00079) | 70150..71442 | - | 1293 | WP_001390622 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| RI195_RS00420 (pCL046-1_00080) | 71442..72098 | - | 657 | WP_001193549 | A24 family peptidase | - |
| RI195_RS00425 (pCL046-1_00081) | 72083..72643 | - | 561 | WP_000014005 | lytic transglycosylase domain-containing protein | virB1 |
| RI195_RS00430 (pCL046-1_00082) | 72653..73267 | - | 615 | WP_000908227 | type 4 pilus major pilin | - |
| RI195_RS00435 (pCL046-1_00083) | 73284..74369 | - | 1086 | WP_001208802 | type II secretion system F family protein | - |
| RI195_RS00440 (pCL046-1_00084) | 74382..75935 | - | 1554 | WP_001545756 | GspE/PulE family protein | virB11 |
| RI195_RS00445 (pCL046-1_00085) | 75946..76398 | - | 453 | WP_001247333 | type IV pilus biogenesis protein PilP | - |
| RI195_RS00450 (pCL046-1_00086) | 76385..77680 | - | 1296 | WP_016245572 | type 4b pilus protein PilO2 | - |
| RI195_RS00455 (pCL046-1_00087) | 77673..79355 | - | 1683 | WP_000748143 | PilN family type IVB pilus formation outer membrane protein | - |
| RI195_RS00460 (pCL046-1_00088) | 79369..79806 | - | 438 | WP_001545758 | type IV pilus biogenesis protein PilM | - |
| RI195_RS00465 (pCL046-1_00089) | 79806..80873 | - | 1068 | WP_001545759 | type IV pilus biogenesis lipoprotein PilL | - |