T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 43677..83179
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RI201_RS00270 (pCL022-1_00051) | 41393..43684 | - | 2292 | WP_012783931 | F-type conjugative transfer protein TrbC | - |
| RI201_RS00275 (pCL022-1_00052) | 43677..44747 | - | 1071 | WP_031942445 | IncI1-type conjugal transfer protein TrbB | trbB |
| RI201_RS00280 (pCL022-1_00053) | 44766..45974 | - | 1209 | WP_001703845 | IncI1-type conjugal transfer protein TrbA | trbA |
| RI201_RS00285 (pCL022-1_00054) | 46280..47059 | - | 780 | WP_275542888 | protein FinQ | - |
| RI201_RS00290 (pCL022-1_00055) | 47686..47838 | + | 153 | WP_001331364 | Hok/Gef family protein | - |
| RI201_RS00295 (pCL022-1_00056) | 47910..48161 | - | 252 | WP_001291964 | hypothetical protein | - |
| RI201_RS00300 | 48662..48757 | + | 96 | WP_000609148 | DinQ-like type I toxin DqlB | - |
| RI201_RS00305 (pCL022-1_00058) | 48822..48998 | - | 177 | WP_001054898 | hypothetical protein | - |
| RI201_RS00310 (pCL022-1_00059) | 49181..49390 | - | 210 | WP_001140543 | hemolysin expression modulator Hha | - |
| RI201_RS00315 (pCL022-1_00060) | 49488..50102 | - | 615 | WP_000578648 | plasmid IncI1-type surface exclusion protein ExcA | - |
| RI201_RS00320 (pCL022-1_00061) | 50178..52346 | - | 2169 | WP_031942447 | IncI1-type conjugal transfer membrane protein TraY | traY |
| RI201_RS00325 (pCL022-1_00062) | 52443..53027 | - | 585 | WP_001037987 | IncI1-type conjugal transfer protein TraX | - |
| RI201_RS00330 (pCL022-1_00063) | 53056..54258 | - | 1203 | WP_031942448 | IncI1-type conjugal transfer protein TraW | traW |
| RI201_RS00335 (pCL022-1_00064) | 54225..54839 | - | 615 | WP_031942449 | IncI1-type conjugal transfer protein TraV | traV |
| RI201_RS00340 (pCL022-1_00065) | 54839..57883 | - | 3045 | WP_001024789 | IncI1-type conjugal transfer protein TraU | traU |
| RI201_RS00345 (pCL022-1_00066) | 57973..58773 | - | 801 | WP_001164783 | IncI1-type conjugal transfer protein TraT | traT |
| RI201_RS00350 (pCL022-1_00067) | 58757..58945 | - | 189 | WP_001277253 | putative conjugal transfer protein TraS | - |
| RI201_RS00355 (pCL022-1_00068) | 59009..59413 | - | 405 | WP_000086965 | IncI1-type conjugal transfer protein TraR | traR |
| RI201_RS00360 (pCL022-1_00069) | 59464..59991 | - | 528 | WP_001055569 | conjugal transfer protein TraQ | traQ |
| RI201_RS00365 (pCL022-1_00070) | 59991..60695 | - | 705 | WP_000801920 | IncI1-type conjugal transfer protein TraP | traP |
| RI201_RS00370 (pCL022-1_00071) | 60695..61984 | - | 1290 | WP_001271994 | conjugal transfer protein TraO | traO |
| RI201_RS00375 (pCL022-1_00072) | 61987..62970 | - | 984 | WP_001191879 | IncI1-type conjugal transfer protein TraN | traN |
| RI201_RS00380 (pCL022-1_00073) | 62981..63673 | - | 693 | WP_000138552 | DotI/IcmL family type IV secretion protein | traM |
| RI201_RS00385 (pCL022-1_00074) | 63670..64017 | - | 348 | WP_001055900 | conjugal transfer protein | traL |
| RI201_RS00390 (pCL022-1_00075) | 64035..67799 | - | 3765 | WP_001141540 | LPD7 domain-containing protein | - |
| RI201_RS00395 (pCL022-1_00076) | 67889..68440 | - | 552 | WP_000014586 | phospholipase D family protein | - |
| RI201_RS00400 (pCL022-1_00077) | 68455..68745 | - | 291 | WP_001314267 | hypothetical protein | traK |
| RI201_RS00405 (pCL022-1_00078) | 68742..69890 | - | 1149 | WP_001024972 | plasmid transfer ATPase TraJ | virB11 |
| RI201_RS00410 (pCL022-1_00079) | 69887..70705 | - | 819 | WP_031942450 | IncI1-type conjugal transfer lipoprotein TraI | traI |
| RI201_RS00415 (pCL022-1_00080) | 70702..71160 | - | 459 | WP_001079808 | IncI1-type conjugal transfer lipoprotein TraH | - |
| RI201_RS00420 (pCL022-1_00081) | 71555..72139 | - | 585 | WP_000977522 | histidine phosphatase family protein | - |
| RI201_RS00425 (pCL022-1_00082) | 72199..73401 | - | 1203 | WP_000976351 | conjugal transfer protein TraF | - |
| RI201_RS00430 (pCL022-1_00083) | 73486..74310 | - | 825 | WP_001238939 | conjugal transfer protein TraE | traE |
| RI201_RS00435 (pCL022-1_00084) | 74461..75615 | - | 1155 | WP_001139957 | tyrosine-type recombinase/integrase | - |
| RI201_RS00440 | 75599..75925 | + | 327 | WP_001213803 | hypothetical protein | - |
| RI201_RS00445 | 76243..76500 | + | 258 | WP_001302706 | hypothetical protein | - |
| RI201_RS00450 | 76790..76945 | - | 156 | WP_001302705 | hypothetical protein | - |
| RI201_RS00455 | 77031..77252 | + | 222 | Protein_90 | prepilin | - |
| RI201_RS00460 (pCL022-1_00086) | 77249..78673 | - | 1425 | WP_001389385 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| RI201_RS00465 (pCL022-1_00087) | 78673..79329 | - | 657 | WP_001193553 | prepilin peptidase | - |
| RI201_RS00470 (pCL022-1_00088) | 79314..79874 | - | 561 | WP_000014116 | lytic transglycosylase domain-containing protein | virB1 |
| RI201_RS00475 (pCL022-1_00089) | 79884..80498 | - | 615 | WP_000959785 | type 4 pilus major pilin | - |
| RI201_RS00480 (pCL022-1_00090) | 80516..81613 | - | 1098 | WP_001208805 | type II secretion system F family protein | - |
| RI201_RS00485 (pCL022-1_00091) | 81626..83179 | - | 1554 | WP_000362202 | GspE/PulE family protein | virB11 |
| RI201_RS00490 (pCL022-1_00092) | 83190..83642 | - | 453 | WP_001247336 | type IV pilus biogenesis protein PilP | - |
| RI201_RS00495 (pCL022-1_00093) | 83629..84924 | - | 1296 | WP_021560540 | type 4b pilus protein PilO2 | - |
| RI201_RS00500 (pCL022-1_00094) | 84917..86599 | - | 1683 | WP_000748143 | PilN family type IVB pilus formation outer membrane protein | - |
| RI201_RS00505 (pCL022-1_00095) | 86613..87050 | - | 438 | WP_000539807 | type IV pilus biogenesis protein PilM | - |
| RI201_RS00510 (pCL022-1_00096) | 87050..88117 | - | 1068 | WP_031942452 | type IV pilus biogenesis lipoprotein PilL | - |