T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 79985..108454
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DY002_RS00500 (DY002_000505) | 76037..76417 | + | 381 | WP_020802391 | hypothetical protein | - |
| DY002_RS00505 (DY002_000510) | 76484..76831 | + | 348 | WP_032445771 | hypothetical protein | - |
| DY002_RS00510 (DY002_000515) | 76926..77072 | + | 147 | WP_004152750 | hypothetical protein | - |
| DY002_RS00515 (DY002_000520) | 77123..77956 | + | 834 | WP_032445769 | N-6 DNA methylase | - |
| DY002_RS00520 (DY002_000525) | 78291..78482 | + | 192 | WP_309353568 | hypothetical protein | - |
| DY002_RS00525 (DY002_000530) | 78769..79590 | + | 822 | WP_004152492 | DUF932 domain-containing protein | - |
| DY002_RS00530 (DY002_000535) | 79623..79952 | + | 330 | WP_011977736 | DUF5983 family protein | - |
| DY002_RS00535 (DY002_000540) | 79985..80470 | - | 486 | WP_001568108 | transglycosylase SLT domain-containing protein | virB1 |
| DY002_RS00540 (DY002_000545) | 80902..81294 | + | 393 | WP_004194114 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| DY002_RS00545 (DY002_000550) | 81524..82225 | + | 702 | WP_040120380 | hypothetical protein | - |
| DY002_RS00550 (DY002_000555) | 82311..82511 | + | 201 | WP_046664192 | TraY domain-containing protein | - |
| DY002_RS00555 (DY002_000560) | 82579..82947 | + | 369 | WP_004194426 | type IV conjugative transfer system pilin TraA | - |
| DY002_RS00560 (DY002_000565) | 82961..83266 | + | 306 | WP_004144424 | type IV conjugative transfer system protein TraL | traL |
| DY002_RS00565 (DY002_000570) | 83286..83852 | + | 567 | WP_004144423 | type IV conjugative transfer system protein TraE | traE |
| DY002_RS00570 (DY002_000575) | 83839..84579 | + | 741 | WP_040120379 | type-F conjugative transfer system secretin TraK | traK |
| DY002_RS00575 (DY002_000580) | 84579..86003 | + | 1425 | WP_040120378 | F-type conjugal transfer pilus assembly protein TraB | traB |
| DY002_RS00580 (DY002_000585) | 86075..86659 | + | 585 | WP_040120377 | type IV conjugative transfer system lipoprotein TraV | traV |
| DY002_RS00585 (DY002_000590) | 86982..87200 | + | 219 | WP_004195468 | hypothetical protein | - |
| DY002_RS00590 (DY002_000595) | 87201..87512 | + | 312 | WP_029497417 | hypothetical protein | - |
| DY002_RS00595 (DY002_000600) | 87579..87983 | + | 405 | WP_004197817 | hypothetical protein | - |
| DY002_RS00600 (DY002_000605) | 88026..88178 | + | 153 | WP_224518895 | hypothetical protein | - |
| DY002_RS00605 (DY002_000610) | 88360..88758 | + | 399 | WP_023179972 | hypothetical protein | - |
| DY002_RS00610 (DY002_000615) | 88830..91469 | + | 2640 | WP_013214024 | type IV secretion system protein TraC | virb4 |
| DY002_RS00615 (DY002_000620) | 91469..91858 | + | 390 | WP_004167468 | type-F conjugative transfer system protein TrbI | - |
| DY002_RS00620 (DY002_000625) | 91858..92493 | + | 636 | WP_029497419 | type-F conjugative transfer system protein TraW | traW |
| DY002_RS00625 (DY002_000630) | 92528..92929 | + | 402 | WP_040120376 | hypothetical protein | - |
| DY002_RS00630 (DY002_000635) | 92926..93915 | + | 990 | WP_029497420 | conjugal transfer pilus assembly protein TraU | traU |
| DY002_RS00635 (DY002_000640) | 93928..94566 | + | 639 | WP_015065635 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| DY002_RS00640 (DY002_000645) | 94625..96580 | + | 1956 | WP_040120375 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| DY002_RS00645 (DY002_000650) | 96612..96866 | + | 255 | WP_004152674 | conjugal transfer protein TrbE | - |
| DY002_RS00650 (DY002_000655) | 96844..97092 | + | 249 | WP_004152675 | hypothetical protein | - |
| DY002_RS00655 (DY002_000660) | 97105..97431 | + | 327 | WP_004144402 | hypothetical protein | - |
| DY002_RS00660 (DY002_000665) | 97452..98204 | + | 753 | WP_004152677 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| DY002_RS00665 (DY002_000670) | 98215..98454 | + | 240 | WP_004144400 | type-F conjugative transfer system pilin chaperone TraQ | - |
| DY002_RS00670 (DY002_000675) | 98426..98983 | + | 558 | WP_013214031 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| DY002_RS00675 (DY002_000680) | 99029..99472 | + | 444 | WP_014343488 | F-type conjugal transfer protein TrbF | - |
| DY002_RS00680 (DY002_000685) | 99450..100829 | + | 1380 | WP_072198320 | conjugal transfer pilus assembly protein TraH | traH |
| DY002_RS00685 (DY002_000690) | 100829..103678 | + | 2850 | WP_040120373 | conjugal transfer mating-pair stabilization protein TraG | traG |
| DY002_RS00690 (DY002_000695) | 103684..104211 | + | 528 | WP_040120388 | conjugal transfer protein TraS | - |
| DY002_RS00695 (DY002_000700) | 104400..105131 | + | 732 | WP_004152629 | conjugal transfer complement resistance protein TraT | - |
| DY002_RS00700 (DY002_000705) | 105324..106013 | + | 690 | WP_072198322 | hypothetical protein | - |
| DY002_RS00705 (DY002_000710) | 106142..108454 | + | 2313 | WP_040120372 | type IV conjugative transfer system coupling protein TraD | virb4 |